RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 SLC30A9Q6PML9 568 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 NYAP1Q6ZVC0 841 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 TMPRSS7Q7RTY8 843 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 PHYKPLQ8IUZ5 450 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 ARL10Q8N8L6 244 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 PBKQ96KB5 322 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 TLR10Q9BXR5 811 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 LRRC40Q9H9A6 602 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 ARFGAP3Q9NP61 516 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 HOMER3Q9NSC5 361 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 TRNAU1APQ9NX07 287 aaKnown RBP10□□□□□ -0.81
BRCA1-227ENST00000591849 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10□□□□□ -0.81
BRCA1-227ENST00000591849 FEZ2Q9UHY8 353 aaPredicted RBP10□□□□□ -0.81
BRCA1-227ENST00000591849 JRKLQ9Y4A0 524 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 WDFY3Q8IZQ1 3526 aa10□□□□□ -0.81
BRCA1-227ENST00000591849 ANKRD11Q6UB99 2663 aaPredicted RBP10□□□□□ -0.81
BRCA1-227ENST00000591849 EME2A4GXA9 379 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-227ENST00000591849 FAM149AA5PLN7 773 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 AURKAO14965 403 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 ZW10O43264 779 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 OPA1O60313 960 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 USP12O75317 370 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 PPFIA2O75334 1257 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 MT-CO3P00414 261 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 GP1BAP07359 652 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 LPOP22079 712 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-227ENST00000591849 HMGCLP35914 325 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 FDFT1P37268 417 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 ADCY8P40145 1251 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 ACTR1BP42025 376 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 DCDC1P59894 354 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 ACTR1AP61163 376 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 PDE1BQ01064 536 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 CTBSQ01459 385 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 SEPT6Q14141 434 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 GSE1Q14687 1217 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 TAF1AQ15573 450 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-227ENST00000591849 SMAD1Q15797 465 aaKnown RBP9.99□□□□□ -0.81
BRCA1-227ENST00000591849 CCNG2Q16589 344 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 HES3Q5TGS1 186 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 KCTD16Q68DU8 428 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 PDPK2PQ6A1A2 396 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 GUSBP11Q6P575 273 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 RANBP10Q6VN20 620 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 PPP1R21Q6ZMI0 780 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 CCNI2Q6ZMN8 369 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-227ENST00000591849 CHST15Q7LFX5 561 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-227ENST00000591849 LINC00523Q86TU6 105 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 SLC35F3Q8IY50 421 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 TTC30BQ8N4P2 665 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 PDCD7Q8N8D1 485 aaKnown RBP9.99□□□□□ -0.81
BRCA1-227ENST00000591849 DNAAF3Q8N9W5 541 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 OR6C4Q8NGE1 309 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 CCL4L1Q8NHW4 92 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 BRSK1Q8TDC3 778 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 ZDHHC1Q8WTX9 485 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 GLYATL1Q969I3 302 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 PLEKHG4BQ96PX9 1271 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 WDR24Q96S15 920 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 NAP1L3Q99457 506 aaPredicted RBP9.99□□□□□ -0.81
BRCA1-227ENST00000591849 BOCQ9BWV1 1114 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 OR2AG1Q9H205 316 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 RMI1Q9H9A7 625 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 TRIM39Q9HCM9 518 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 TAAR2Q9P1P5 351 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 VPS18Q9P253 973 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 CLCA2Q9UQC9 943 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 PRKAB1Q9Y478 270 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 AKAP13Q12802 2813 aa9.99□□□□□ -0.81
BRCA1-227ENST00000591849 TMEM131Q92545 1883 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 BAHCC1Q9P281 2608 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 GLYATL1P3A0A0U1RQE8 302 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 RHPN2P1A8MT19 583 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 FADS2P1A8MWK0 482 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 GRID2O43424 1007 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 SNX2O60749 519 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 DKK1O94907 266 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 CDK14O94921 469 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 METTL18O95568 372 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 SOD1P00441 154 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 TPH1P17752 444 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 AK4P27144 223 aaPredicted RBP9.98□□□□□ -0.81
BRCA1-227ENST00000591849 ADRA1AP35348 466 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 GDF10P55107 478 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 CLDN6P56747 220 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 TARDBPQ13148 414 aaKnown RBP eCLIP9.98□□□□□ -0.81
BRCA1-227ENST00000591849 OLIG2Q13516 323 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 ITGA9Q13797 1035 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 CHRNA6Q15825 494 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 PYCR3Q53H96 274 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 ZNF648Q5T619 568 aaPredicted RBP9.98□□□□□ -0.81
BRCA1-227ENST00000591849 FAM151BQ6UXP7 276 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 UNQ6494/PRO21346Q6UXR6 183 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 MARCH9Q86YJ5 346 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 REXO1L1PQ8IX06 675 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 SLC35F6Q8N357 371 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 Q8N9G6 341 aaPredicted RBP9.98□□□□□ -0.81
BRCA1-227ENST00000591849 KYQ8NBH2 561 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 OR4K2Q8NGD2 314 aa9.98□□□□□ -0.81
BRCA1-227ENST00000591849 WDR48Q8TAF3 677 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms