RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 P3H1Q32P28 736 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 TEX44Q53QW1 395 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 ANKRD39Q53RE8 183 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 RALGPS1Q5JS13 557 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 LYSMD4Q5XG99 296 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 DENND2CQ68D51 928 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 TBC1D3GQ6DHY5 549 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 TBC1D3CQ6IPX1 549 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 TTC27Q6P3X3 843 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 BRAT1Q6PJG6 821 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 CCDC137Q6PK04 289 aaKnown RBP6.42□□□□□ -1.38
VPS4B-205ENST00000591383 SLC36A4Q6YBV0 504 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 USP45Q70EL2 814 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 TTC7BQ86TV6 843 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 C11orf74Q86VG3 221 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 TBC1D3Q8IZP1 549 aaPredicted RBP6.42□□□□□ -1.38
VPS4B-205ENST00000591383 ABCA7Q8IZY2 2146 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 ZCCHC9Q8N567 271 aaKnown RBP6.42□□□□□ -1.38
VPS4B-205ENST00000591383 SLC25A41Q8N5S1 370 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 C12orf50Q8NA57 414 aaPredicted RBP6.42□□□□□ -1.38
VPS4B-205ENST00000591383 OR2T34Q8NGX1 318 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 ARRDC2Q8TBH0 407 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 CXorf40AQ8TE69 158 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 GRK7Q8WTQ7 553 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 KLK6Q92876 244 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 LRRC45Q96CN5 670 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 RMDN1Q96DB5 314 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 IMP4Q96G21 291 aaKnown RBP6.42□□□□□ -1.38
VPS4B-205ENST00000591383 OXNAD1Q96HP4 312 aaPredicted RBP6.42□□□□□ -1.38
VPS4B-205ENST00000591383 NSMCE3Q96MG7 304 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 ZNF641Q96N77 438 aaPredicted RBP6.42□□□□□ -1.38
VPS4B-205ENST00000591383 APOL2Q9BQE5 337 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 HDAC8Q9BY41 377 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 CPEB1Q9BZB8 566 aaKnown RBP6.42□□□□□ -1.38
VPS4B-205ENST00000591383 DDX47Q9H0S4 455 aaKnown RBP6.42□□□□□ -1.38
VPS4B-205ENST00000591383 NEUROG2Q9H2A3 272 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 C6orf106Q9H6K1 298 aaPredicted RBP6.42□□□□□ -1.38
VPS4B-205ENST00000591383 SGK2Q9HBY8 427 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 PCDH9Q9HC56 1237 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 PREBQ9HCU5 417 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 HOMER3Q9NSC5 361 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 INTS7Q9NVH2 962 aaKnown RBP6.42□□□□□ -1.38
VPS4B-205ENST00000591383 GOLGA6AQ9NYA3 693 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 WSB2Q9NYS7 404 aaPredicted RBP6.42□□□□□ -1.38
VPS4B-205ENST00000591383 B4GALT6Q9UBX8 382 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 FAM153AQ9UHL3 310 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 MCM8Q9UJA3 840 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 TTC7AQ9ULT0 858 aaPredicted RBP6.42□□□□□ -1.38
VPS4B-205ENST00000591383 CHKBQ9Y259 395 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 ZNF451Q9Y4E5 1061 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 ZFHX2Q9C0A1 2572 aaPredicted RBP6.42□□□□□ -1.38
VPS4B-205ENST00000591383 TRPM6Q9BX84 2022 aa6.42□□□□□ -1.38
VPS4B-205ENST00000591383 LAMA1P25391 3075 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 BPTFQ12830 3046 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 C1orf232A0A0U1RR37 186 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 CAPN8A6NHC0 703 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 NPIPB15A6NHN6 443 aaPredicted RBP6.41□□□□□ -1.38
VPS4B-205ENST00000591383 ALG1L2C9J202 215 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 TBX1O43435 398 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 RNGTTO60942 597 aaKnown RBP6.41□□□□□ -1.38
VPS4B-205ENST00000591383 USP12O75317 370 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 RHOBTB1O94844 696 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 METTL18O95568 372 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 NDST3O95803 873 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 IGLV3-19P01714 112 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 PDHA1P08559 390 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 ITIH2P19823 946 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 PMLP29590 882 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 VIPR1P32241 457 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 COILP38432 576 aaPredicted RBP6.41□□□□□ -1.38
VPS4B-205ENST00000591383 PTGER3P43115 390 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 CHRNA4P43681 627 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 TAS2R38P59533 333 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 CREB5Q02930 508 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 GPS1Q13098 491 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 MPP3Q13368 585 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 SPARCL1Q14515 664 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 PTPRRQ15256 657 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 CCDC6Q16204 474 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 PLK5Q496M5 336 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 SETMARQ53H47 684 aaPredicted RBP6.41□□□□□ -1.38
VPS4B-205ENST00000591383 DNTTIP2Q5QJE6 756 aaKnown RBP6.41□□□□□ -1.38
VPS4B-205ENST00000591383 SEL1L3Q68CR1 1132 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 PMS2CLQ68D20 193 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 KIAA0895LQ68EN5 471 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 KDELC1Q6UW63 502 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 PPP1R21Q6ZMI0 780 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 PTAR1Q7Z6K3 402 aaPredicted RBP6.41□□□□□ -1.38
VPS4B-205ENST00000591383 PRPF39Q86UA1 669 aaKnown RBP6.41□□□□□ -1.38
VPS4B-205ENST00000591383 CREG2Q8IUH2 290 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 NDUFAF2Q8N183 169 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 AFAP1L2Q8N4X5 818 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 GLIS1Q8NBF1 620 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 ZBTB44Q8NCP5 570 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 BVESQ8NE79 360 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 KIF18AQ8NI77 898 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 NELL1Q92832 810 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 ISL2Q96A47 359 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 RAB7BQ96AH8 199 aa6.41□□□□□ -1.38
VPS4B-205ENST00000591383 ECHDC3Q96DC8 303 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms