RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 KIAA1468Q9P260 1216 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 ZNHIT2Q9UHR6 403 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 LNPEPQ9UIQ6 1025 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 SLC30A1Q9Y6M5 507 aa12.65□□□□□ -0.38
PRKCSH-210ENST00000589990 PCSK5Q92824 1860 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 TCRBV5S1A1TA0A578 114 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 ARHGAP42A6NI28 874 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 ARGFXA6NJG6 315 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 FGF10O15520 208 aaPredicted RBP12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 DNAJC6O75061 913 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 ANKRD34CP0C6C1 535 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 UNGP13051 313 aaPredicted RBP12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 ELAVL4P26378 380 aaKnown RBP12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 TEAD1P28347 426 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 CASP14P31944 242 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 KLK7P49862 253 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 CCL11P51671 97 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 MAXP61244 160 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 AP1S1P61966 158 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 CDR2Q01850 454 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 MAN2A1Q16706 1144 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 VWA3BQ502W6 1294 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 SMYD5Q6GMV2 418 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 JMJD6Q6NYC1 403 aaPredicted RBP12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 ADAMTSL4Q6UY14 1074 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 RASGRP3Q8IV61 690 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 SPOCK2Q92563 424 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 AP2M1Q96CW1 435 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 COX14Q96I36 57 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 C9orf72Q96LT7 481 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 TGM7Q96PF1 710 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 PSKH2Q96QS6 385 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 SELENOOQ9BVL4 669 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 DONSONQ9NYP3 566 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 SCHIP1Q9P0W5 487 aaPredicted RBP12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 MAP10Q9P2G4 905 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 PCDHGA6Q9Y5G7 932 aa12.64□□□□□ -0.39
PRKCSH-210ENST00000589990 SPAG6O75602 509 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 PEX11BO96011 259 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 C9P02748 559 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 PDHA1P08559 390 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 ACP5P13686 325 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 NOP2P46087 812 aaKnown RBP12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 ZNF143P52747 638 aaPredicted RBP12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 EPHA4P54764 986 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 DPTQ07507 201 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 PEX6Q13608 980 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 LAMB3Q13751 1172 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 LBRQ14739 615 aaKnown RBP12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 NR6A1Q15406 480 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 CAMK4Q16566 473 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 FAM69BQ5VUD6 431 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 LRRC66Q68CR7 880 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 LYSMD3Q7Z3D4 306 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 MCEEQ96PE7 176 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 MCCC1Q96RQ3 725 aaPredicted RBP12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 PEBP4Q96S96 227 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 KCTD15Q96SI1 283 aaPredicted RBP12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 STK33Q9BYT3 514 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 VPS16Q9H269 839 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 LHX9Q9NQ69 397 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 ADAM22Q9P0K1 906 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 CPNE7Q9UBL6 633 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 CNOT8Q9UFF9 292 aaKnown RBP12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 CNOT6Q9ULM6 557 aaKnown RBP12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 HIVEP1P15822 2718 aa12.63□□□□□ -0.39
PRKCSH-210ENST00000589990 ZFHX3Q15911 3703 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 GOLGA6L3A6NEY3 463 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 SIGLEC16A6NMB1 481 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 EEF2KO00418 725 aaKnown RBP12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 EPHB6O15197 1021 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 ASMTLO95671 621 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 CYP2A6P11509 494 aaPredicted RBP12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 PRKCSHP14314 528 aaPredicted RBP12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 ERCC2P18074 760 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 GRNP28799 593 aaKnown RBP12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 GARSP41250 739 aaKnown RBP12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 RIPPLY3P57055 190 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 PPP1CAP62136 330 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 UBE2IP63279 158 aaKnown RBP12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 PTSQ03393 145 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 IL10RBQ08334 325 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 LRP8Q14114 963 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 IHHQ14623 411 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 PAPD7Q5XG87 772 aaKnown RBP12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 SLC6A19Q695T7 634 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 PLXDC1Q8IUK5 500 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 ARFGAP1Q8N6T3 406 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 RBMXL3Q8N7X1 1067 aaKnown RBP12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 C3orf20Q8ND61 904 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 PIH1D2Q8WWB5 315 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 RSC1A1Q92681 617 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 SCRN2Q96FV2 425 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 PLEKHG4BQ96PX9 1271 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 RANBP9Q96S59 729 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 RIOK2Q9BVS4 552 aaKnown RBP12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 BRD8Q9H0E9 1235 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 ING2Q9H160 280 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 GANQ9H2C0 597 aa12.62□□□□□ -0.39
PRKCSH-210ENST00000589990 DHX35Q9H5Z1 703 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms