RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	SUDS3	Q9H7L9	328 aa	Predicted RBP	17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	BPIFA1	Q9NP55	256 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	ARFGAP3	Q9NP61	516 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	TRNAU1AP	Q9NX07	287 aa	Known RBP	17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	SIRPG	Q9P1W8	387 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	MOSPD1	Q9UJG1	213 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	GPR34	Q9UPC5	381 aa		17.18	■□□□□ 0.34
MBD1-221	ENST00000589867	CPED1	A4D0V7	1026 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	BUD23	O43709	281 aa	Known RBP	17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	USP12	O75317	370 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	ANXA9	O76027	345 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	PYGL	P06737	847 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	GP1BA	P07359	652 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	CDK4	P11802	303 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	CTBS	Q01459	385 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	SPARCL1	Q14515	664 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	HS1BP3	Q53T59	392 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	SEL1L2	Q5TEA6	688 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	MICALCL	Q6ZW33	695 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	TAF8	Q7Z7C8	310 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	PRUNE1	Q86TP1	453 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	C17orf82	Q86X59	251 aa	Predicted RBP	17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	GKN2	Q86XP6	184 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	GALNT15	Q8N3T1	639 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	TRAM1L1	Q8N609	369 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	GLIS1	Q8NBF1	620 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	TRIM58	Q8NG06	486 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	TRABD	Q9H4I3	376 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	IL26	Q9NPH9	171 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	KCTD3	Q9Y597	815 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	ZFHX4	Q86UP3	3567 aa		17.17	■□□□□ 0.34
MBD1-221	ENST00000589867	GPR39	O43194	453 aa		17.16	■□□□□ 0.34
MBD1-221	ENST00000589867	PROS1	P07225	676 aa		17.16	■□□□□ 0.34
MBD1-221	ENST00000589867	PARP6	Q2NL67	630 aa		17.16	■□□□□ 0.34
MBD1-221	ENST00000589867	CCDC70	Q6NSX1	233 aa		17.16	■□□□□ 0.34
MBD1-221	ENST00000589867	MARK2	Q7KZI7	788 aa	Known RBP	17.16	■□□□□ 0.34
MBD1-221	ENST00000589867	CACTIN-AS1	Q8N1I8	211 aa		17.16	■□□□□ 0.34
MBD1-221	ENST00000589867	ARL10	Q8N8L6	244 aa		17.16	■□□□□ 0.34
MBD1-221	ENST00000589867	DCBLD1	Q8N8Z6	715 aa		17.16	■□□□□ 0.34
MBD1-221	ENST00000589867	FAM46D	Q8NEK8	389 aa		17.16	■□□□□ 0.34
MBD1-221	ENST00000589867	BLOC1S5	Q8TDH9	187 aa		17.16	■□□□□ 0.34
MBD1-221	ENST00000589867	ALS2CR12	Q96Q35	445 aa		17.16	■□□□□ 0.34
MBD1-221	ENST00000589867	SRPK1	Q96SB4	655 aa	Known RBP	17.16	■□□□□ 0.34
MBD1-221	ENST00000589867	SPATA16	Q9BXB7	569 aa		17.16	■□□□□ 0.34
MBD1-221	ENST00000589867	ARNT2	Q9HBZ2	717 aa		17.16	■□□□□ 0.34
MBD1-221	ENST00000589867	TAAR2	Q9P1P5	351 aa		17.16	■□□□□ 0.34
MBD1-221	ENST00000589867	VPS18	Q9P253	973 aa		17.16	■□□□□ 0.34
MBD1-221	ENST00000589867	ATXN10	Q9UBB4	475 aa		17.16	■□□□□ 0.34
MBD1-221	ENST00000589867	GULP1	Q9UBP9	304 aa		17.16	■□□□□ 0.34
MBD1-221	ENST00000589867	PADI4	Q9UM07	663 aa		17.16	■□□□□ 0.34
MBD1-221	ENST00000589867	PRKAB1	Q9Y478	270 aa		17.16	■□□□□ 0.34
MBD1-221	ENST00000589867	ARL5A	Q9Y689	179 aa		17.16	■□□□□ 0.34
MBD1-221	ENST00000589867	TAF4	O00268	1085 aa		17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	EML2	O95834	649 aa		17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	ETS1	P14921	441 aa		17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	ZNF8	P17098	575 aa	Predicted RBP	17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	CXCR5	P32302	372 aa		17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	DUSP3	P51452	185 aa	Predicted RBP	17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	E2F1	Q01094	437 aa		17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	TARDBP	Q13148	414 aa	Known RBP eCLIP	17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	HLTF	Q14527	1009 aa	Known RBP eCLIP	17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	KCTD19	Q17RG1	926 aa	Predicted RBP	17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	ATP13A5	Q4VNC0	1218 aa		17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	ADGRG6	Q86SQ4	1221 aa		17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	KDF1	Q8NAX2	398 aa	Predicted RBP	17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	PATE1	Q8WXA2	126 aa		17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	GLYATL1	Q969I3	302 aa		17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	PLEKHG4B	Q96PX9	1271 aa		17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	OR2M4	Q96R27	311 aa		17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	ZSCAN5A	Q9BUG6	496 aa		17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	FSD1L	Q9BXM9	530 aa		17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	CDH19	Q9H159	772 aa		17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	NCKIPSD	Q9NZQ3	722 aa		17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	HACD3	Q9P035	362 aa		17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	DOLK	Q9UPQ8	538 aa		17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	AAR2	Q9Y312	384 aa	Known RBP	17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	PKD1L2	Q7Z442	2459 aa		17.15	■□□□□ 0.34
MBD1-221	ENST00000589867	TRABD2B	A6NFA1	517 aa		17.14	■□□□□ 0.33
MBD1-221	ENST00000589867	MTX2	O75431	263 aa		17.14	■□□□□ 0.33
MBD1-221	ENST00000589867	STK10	O94804	968 aa	Known RBP	17.14	■□□□□ 0.33
MBD1-221	ENST00000589867	MT-CO3	P00414	261 aa		17.14	■□□□□ 0.33
MBD1-221	ENST00000589867	CHRNA6	Q15825	494 aa		17.14	■□□□□ 0.33
MBD1-221	ENST00000589867	ZNF569	Q5MCW4	686 aa		17.14	■□□□□ 0.33
MBD1-221	ENST00000589867	PDPK2P	Q6A1A2	396 aa		17.14	■□□□□ 0.33
MBD1-221	ENST00000589867	TAB3	Q8N5C8	712 aa	Predicted RBP	17.14	■□□□□ 0.33
MBD1-221	ENST00000589867	DTX3L	Q8TDB6	740 aa		17.14	■□□□□ 0.33
MBD1-221	ENST00000589867	TBL1Y	Q9BQ87	522 aa		17.14	■□□□□ 0.33
MBD1-221	ENST00000589867	FERMT1	Q9BQL6	677 aa		17.14	■□□□□ 0.33
MBD1-221	ENST00000589867	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	17.14	■□□□□ 0.33
MBD1-221	ENST00000589867	RAD18	Q9NS91	495 aa		17.14	■□□□□ 0.33
MBD1-221	ENST00000589867	GPSM3	Q9Y4H4	160 aa		17.14	■□□□□ 0.33
MBD1-221	ENST00000589867	DSP	P15924	2871 aa	Known RBP	17.14	■□□□□ 0.33
MBD1-221	ENST00000589867		A0A1W2PNU3	283 aa	Predicted RBP	17.13	■□□□□ 0.33
MBD1-221	ENST00000589867	PRR19	A6NJB7	356 aa		17.13	■□□□□ 0.33
MBD1-221	ENST00000589867		B4DGG1	531 aa		17.13	■□□□□ 0.33
MBD1-221	ENST00000589867	NTN3	O00634	580 aa	Predicted RBP	17.13	■□□□□ 0.33
MBD1-221	ENST00000589867	CHUK	O15111	745 aa		17.13	■□□□□ 0.33
MBD1-221	ENST00000589867	NUAK1	O60285	661 aa		17.13	■□□□□ 0.33
MBD1-221	ENST00000589867	UGT1A9	O60656	530 aa		17.13	■□□□□ 0.33
MBD1-221	ENST00000589867	ZNF189	O75820	626 aa	Predicted RBP	17.13	■□□□□ 0.33

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