RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 TRPM7Q96QT4 1865 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 MYLKQ15746 1914 aa18.5■□□□□ 0.55
DDX39A-206ENST00000587730 J3KR12 359 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 DLGAP1O14490 977 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 SLC4A1P02730 911 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 PYGLP06737 847 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 UROSP10746 265 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 CD9P21926 228 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 HTR1EP28566 365 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 HMOX2P30519 316 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 AFF1P51825 1210 aaKnown RBP18.49■□□□□ 0.55
DDX39A-206ENST00000587730 YWHAHQ04917 246 aaPredicted RBP18.49■□□□□ 0.55
DDX39A-206ENST00000587730 OR4D1Q15615 310 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 MS4A13Q5J8X5 152 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 TMIGD2Q96BF3 282 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 TBATAQ96M53 351 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 SLC52A3Q9NQ40 469 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 ZNF639Q9UID6 485 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 FADS3Q9Y5Q0 445 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 NYNRINQ9P2P1 1898 aaKnown RBP18.49■□□□□ 0.55
DDX39A-206ENST00000587730 A0A1B0GTW7 788 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 SH3PXD2BA1X283 911 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 DRGXA6NNA5 263 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 TULP3O75386 442 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 MT-CO1P00395 513 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 RPS17P08708 135 aaKnown RBP18.49■□□□□ 0.55
DDX39A-206ENST00000587730 DCKP27707 260 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 BRCC3P46736 316 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 RPS9P46781 194 aaKnown RBP18.49■□□□□ 0.55
DDX39A-206ENST00000587730 GSK3BP49841 420 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 MAXP61244 160 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 SERINC3Q13530 473 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 GRB7Q14451 532 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 POLD3Q15054 466 aaPredicted RBP18.49■□□□□ 0.55
DDX39A-206ENST00000587730 CMTR2Q8IYT2 770 aaKnown RBP18.49■□□□□ 0.55
DDX39A-206ENST00000587730 RYBPQ8N488 228 aaPredicted RBP18.49■□□□□ 0.55
DDX39A-206ENST00000587730 EXT2Q93063 718 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 PSMG2Q969U7 264 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 PAAF1Q9BRP4 392 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 IL1RL2Q9HB29 575 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 NMUR1Q9HB89 426 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 MAGEL2Q9UJ55 1249 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 OAZ3Q9UMX2 235 aa18.49■□□□□ 0.55
DDX39A-206ENST00000587730 A0A0U1RQF3 1178 aa18.48■□□□□ 0.55
DDX39A-206ENST00000587730 FAM234BA2RU67 622 aa18.48■□□□□ 0.55
DDX39A-206ENST00000587730 CCDC162PA2VCL2 907 aa18.48■□□□□ 0.55
DDX39A-206ENST00000587730 SUPT3HB4E1H0 165 aa18.48■□□□□ 0.55
DDX39A-206ENST00000587730 KLK8O60259 260 aa18.48■□□□□ 0.55
DDX39A-206ENST00000587730 SUPT3HO75486 399 aa18.48■□□□□ 0.55
DDX39A-206ENST00000587730 ESRRBO95718 433 aa18.48■□□□□ 0.55
DDX39A-206ENST00000587730 ENO2P09104 434 aaPredicted RBP18.48■□□□□ 0.55
DDX39A-206ENST00000587730 ARSAP15289 507 aa18.48■□□□□ 0.55
DDX39A-206ENST00000587730 TSPAN8P19075 237 aa18.48■□□□□ 0.55
DDX39A-206ENST00000587730 BEX3Q00994 111 aa18.48■□□□□ 0.55
DDX39A-206ENST00000587730 ZNF235Q14590 738 aa18.48■□□□□ 0.55
DDX39A-206ENST00000587730 TRIP4Q15650 581 aaPredicted RBP18.48■□□□□ 0.55
DDX39A-206ENST00000587730 PITRM1Q5JRX3 1037 aa18.48■□□□□ 0.55
DDX39A-206ENST00000587730 ALG1LQ6GMV1 187 aa18.48■□□□□ 0.55
DDX39A-206ENST00000587730 AFTPHQ6ULP2 937 aa18.48■□□□□ 0.55
DDX39A-206ENST00000587730 CD300LGQ6UXG3 332 aa18.48■□□□□ 0.55
DDX39A-206ENST00000587730 TFAP2DQ7Z6R9 452 aa18.48■□□□□ 0.55
DDX39A-206ENST00000587730 TMEM199Q8N511 208 aa18.48■□□□□ 0.55
DDX39A-206ENST00000587730 POP5Q969H6 163 aaKnown RBP18.48■□□□□ 0.55
DDX39A-206ENST00000587730 KLHL5Q96PQ7 755 aa18.48■□□□□ 0.55
DDX39A-206ENST00000587730 CXorf21Q9HAI6 301 aa18.48■□□□□ 0.55
DDX39A-206ENST00000587730 CHCHD3Q9NX63 227 aaKnown RBP18.48■□□□□ 0.55
DDX39A-206ENST00000587730 PCNTO95613 3336 aa18.48■□□□□ 0.55
DDX39A-206ENST00000587730 TCRBV5S2A0A599 114 aa18.47■□□□□ 0.55
DDX39A-206ENST00000587730 CCDC154A6NI56 674 aa18.47■□□□□ 0.55
DDX39A-206ENST00000587730 PLOD2O00469 737 aa18.47■□□□□ 0.55
DDX39A-206ENST00000587730 ACOX3O15254 700 aa18.47■□□□□ 0.55
DDX39A-206ENST00000587730 INPP4BO15327 924 aa18.47■□□□□ 0.55
DDX39A-206ENST00000587730 SNX2O60749 519 aa18.47■□□□□ 0.55
DDX39A-206ENST00000587730 SLC22A3O75751 556 aa18.47■□□□□ 0.55
DDX39A-206ENST00000587730 RHOBTB1O94844 696 aa18.47■□□□□ 0.55
DDX39A-206ENST00000587730 NDST3O95803 873 aa18.47■□□□□ 0.55
DDX39A-206ENST00000587730 SERPINF2P08697 491 aa18.47■□□□□ 0.55
DDX39A-206ENST00000587730 HAPLN1P10915 354 aaPredicted RBP18.47■□□□□ 0.55
DDX39A-206ENST00000587730 HOXB6P17509 224 aaKnown RBP18.47■□□□□ 0.55
DDX39A-206ENST00000587730 EEF1DP29692 281 aaKnown RBP18.47■□□□□ 0.55
DDX39A-206ENST00000587730 ERVK-8P63133 956 aa18.47■□□□□ 0.55
DDX39A-206ENST00000587730 LIPEQ05469 1076 aa18.47■□□□□ 0.55
DDX39A-206ENST00000587730 XKR7Q5GH72 579 aa18.47■□□□□ 0.55
DDX39A-206ENST00000587730 CCNYL2Q5T2Q4 361 aa18.47■□□□□ 0.55
DDX39A-206ENST00000587730 LDB1Q86U70 411 aaPredicted RBP18.47■□□□□ 0.55
DDX39A-206ENST00000587730 CYGBQ8WWM9 190 aa18.47■□□□□ 0.55
DDX39A-206ENST00000587730 RDH12Q96NR8 316 aa18.47■□□□□ 0.55
DDX39A-206ENST00000587730 TMEM209Q96SK2 561 aa18.47■□□□□ 0.55
DDX39A-206ENST00000587730 SEMA3CQ99985 751 aa18.47■□□□□ 0.55
DDX39A-206ENST00000587730 NPLQ9BXD5 320 aaPredicted RBP18.47■□□□□ 0.55
DDX39A-206ENST00000587730 SEZ6LQ9BYH1 1024 aa18.47■□□□□ 0.55
DDX39A-206ENST00000587730 TUBB1Q9H4B7 451 aa18.47■□□□□ 0.55
DDX39A-206ENST00000587730 EGFL7Q9UHF1 273 aa18.47■□□□□ 0.55
DDX39A-206ENST00000587730 INPPL1O15357 1258 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 PRAMEF11O60813 436 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 SIX3O95343 332 aaPredicted RBP18.46■□□□□ 0.55
DDX39A-206ENST00000587730 LINC00032P0C843 101 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 PSMA3P25788 255 aa18.46■□□□□ 0.55
DDX39A-206ENST00000587730 TIAL1Q01085 375 aaKnown RBP eCLIP18.46■□□□□ 0.55
DDX39A-206ENST00000587730 USP51Q70EK9 711 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms