RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 GORASP1Q9BQQ3 440 aa18.9■□□□□ 0.62
TPM4-204ENST00000586499 SPATA16Q9BXB7 569 aa18.9■□□□□ 0.62
TPM4-204ENST00000586499 LRIT1Q9P2V4 623 aa18.9■□□□□ 0.62
TPM4-204ENST00000586499 ZNHIT2Q9UHR6 403 aa18.9■□□□□ 0.62
TPM4-204ENST00000586499 TRHDEQ9UKU6 1024 aa18.9■□□□□ 0.62
TPM4-204ENST00000586499 ENTPD2Q9Y5L3 495 aa18.9■□□□□ 0.62
TPM4-204ENST00000586499 ADGRG1Q9Y653 693 aa18.9■□□□□ 0.62
TPM4-204ENST00000586499 PKD1L2Q7Z442 2459 aa18.9■□□□□ 0.62
TPM4-204ENST00000586499 ARHGEF17Q96PE2 2063 aaPredicted RBP18.89■□□□□ 0.62
TPM4-204ENST00000586499 A0A1W2PNU3 283 aaPredicted RBP18.89■□□□□ 0.61
TPM4-204ENST00000586499 GOLGA6L6A8MZA4 724 aa18.89■□□□□ 0.61
TPM4-204ENST00000586499 TLX3O43711 291 aaPredicted RBP18.89■□□□□ 0.61
TPM4-204ENST00000586499 DNAJC6O75061 913 aa18.89■□□□□ 0.61
TPM4-204ENST00000586499 TJP3O95049 919 aa18.89■□□□□ 0.61
TPM4-204ENST00000586499 ECEL1O95672 775 aa18.89■□□□□ 0.61
TPM4-204ENST00000586499 RPLP0P05388 317 aaKnown RBP18.89■□□□□ 0.61
TPM4-204ENST00000586499 GLB1P16278 677 aa18.89■□□□□ 0.61
TPM4-204ENST00000586499 BPIP17213 487 aa18.89■□□□□ 0.61
TPM4-204ENST00000586499 CETN2P41208 172 aa18.89■□□□□ 0.61
TPM4-204ENST00000586499 ACTR1BP42025 376 aa18.89■□□□□ 0.61
TPM4-204ENST00000586499 PDX1P52945 283 aa18.89■□□□□ 0.61
TPM4-204ENST00000586499 ACTR1AP61163 376 aa18.89■□□□□ 0.61
TPM4-204ENST00000586499 SPIDRQ14159 915 aa18.89■□□□□ 0.61
TPM4-204ENST00000586499 DARS2Q6PI48 645 aaKnown RBP18.89■□□□□ 0.61
TPM4-204ENST00000586499 GALNT13Q8IUC8 556 aa18.89■□□□□ 0.61
TPM4-204ENST00000586499 OR6C4Q8NGE1 309 aa18.89■□□□□ 0.61
TPM4-204ENST00000586499 CDH19Q9H159 772 aa18.89■□□□□ 0.61
TPM4-204ENST00000586499 ACACAQ13085 2346 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 PMS2P1A4D2B8 440 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 KCNN4O15554 427 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 TCEA3O75764 348 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 AGTP01019 485 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 EPOP01588 193 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 GSDMDP57764 484 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 GABREP78334 506 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 MPP3Q13368 585 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 OLIG2Q13516 323 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 SLC1A5Q15758 541 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 ANKRD20A2Q5SQ80 823 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 ANKRD20A1Q5TYW2 823 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 ANKRD20A3Q5VUR7 823 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 B3GNT8Q7Z7M8 397 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 C17orf82Q86X59 251 aaPredicted RBP18.88■□□□□ 0.61
TPM4-204ENST00000586499 CCNJLQ8IV13 435 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 CDKL3Q8IVW4 592 aaPredicted RBP18.88■□□□□ 0.61
TPM4-204ENST00000586499 NAGSQ8N159 534 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 TXLNBQ8N3L3 684 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 ARL14Q8N4G2 192 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 UBL4BQ8N7F7 174 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 HNRNPLLQ8WVV9 542 aaKnown RBP18.88■□□□□ 0.61
TPM4-204ENST00000586499 DCBLD2Q96PD2 775 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 GBA3Q9H227 469 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 LRRN3Q9H3W5 708 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 VPS18Q9P253 973 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 ATXN10Q9UBB4 475 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 ATXN7L1Q9ULK2 861 aaPredicted RBP18.88■□□□□ 0.61
TPM4-204ENST00000586499 GUCA1BQ9UMX6 200 aa18.88■□□□□ 0.61
TPM4-204ENST00000586499 TRBV23OR9-2A0A075B6M9 112 aa18.87■□□□□ 0.61
TPM4-204ENST00000586499 TCRBV7S2A1N4TA0A589 114 aa18.87■□□□□ 0.61
TPM4-204ENST00000586499 MIF4GDA9UHW6 222 aaKnown RBP18.87■□□□□ 0.61
TPM4-204ENST00000586499 BUD23O43709 281 aaKnown RBP18.87■□□□□ 0.61
TPM4-204ENST00000586499 SLC25A14O95258 325 aaPredicted RBP18.87■□□□□ 0.61
TPM4-204ENST00000586499 EML2O95834 649 aa18.87■□□□□ 0.61
TPM4-204ENST00000586499 C3orf38Q5JPI3 329 aa18.87■□□□□ 0.61
TPM4-204ENST00000586499 CHST15Q7LFX5 561 aaPredicted RBP18.87■□□□□ 0.61
TPM4-204ENST00000586499 TTC30BQ8N4P2 665 aa18.87■□□□□ 0.61
TPM4-204ENST00000586499 WDR48Q8TAF3 677 aa18.87■□□□□ 0.61
TPM4-204ENST00000586499 CCDC110Q8TBZ0 833 aa18.87■□□□□ 0.61
TPM4-204ENST00000586499 BLOC1S5Q8TDH9 187 aa18.87■□□□□ 0.61
TPM4-204ENST00000586499 HES6Q96HZ4 224 aa18.87■□□□□ 0.61
TPM4-204ENST00000586499 GFM1Q96RP9 751 aaKnown RBP18.87■□□□□ 0.61
TPM4-204ENST00000586499 ZSCAN5AQ9BUG6 496 aa18.87■□□□□ 0.61
TPM4-204ENST00000586499 FICDQ9BVA6 458 aa18.87■□□□□ 0.61
TPM4-204ENST00000586499 FOXP3Q9BZS1 431 aa18.87■□□□□ 0.61
TPM4-204ENST00000586499 APPL1Q9UKG1 709 aa18.87■□□□□ 0.61
TPM4-204ENST00000586499 TMPRSS11EQ9UL52 423 aa18.87■□□□□ 0.61
TPM4-204ENST00000586499 SATB2Q9UPW6 733 aa18.87■□□□□ 0.61
TPM4-204ENST00000586499 URB1O60287 2271 aaKnown RBP18.86■□□□□ 0.61
TPM4-204ENST00000586499 B4GAT1O43505 415 aa18.86■□□□□ 0.61
TPM4-204ENST00000586499 NUDT21O43809 227 aaKnown RBP18.86■□□□□ 0.61
TPM4-204ENST00000586499 PTMAP06454 111 aaKnown RBP18.86■□□□□ 0.61
TPM4-204ENST00000586499 ZNF8P17098 575 aaPredicted RBP18.86■□□□□ 0.61
TPM4-204ENST00000586499 PSMB4P28070 264 aa18.86■□□□□ 0.61
TPM4-204ENST00000586499 HMGCLP35914 325 aa18.86■□□□□ 0.61
TPM4-204ENST00000586499 TNNT3P45378 269 aaPredicted RBP18.86■□□□□ 0.61
TPM4-204ENST00000586499 LSSP48449 732 aa18.86■□□□□ 0.61
TPM4-204ENST00000586499 OR1D5P58170 312 aa18.86■□□□□ 0.61
TPM4-204ENST00000586499 DCDC1P59894 354 aa18.86■□□□□ 0.61
TPM4-204ENST00000586499 B4GALNT1Q00973 533 aa18.86■□□□□ 0.61
TPM4-204ENST00000586499 PTPRCAPQ14761 206 aa18.86■□□□□ 0.61
TPM4-204ENST00000586499 ZNF569Q5MCW4 686 aa18.86■□□□□ 0.61
TPM4-204ENST00000586499 FOXR1Q6PIV2 292 aa18.86■□□□□ 0.61
TPM4-204ENST00000586499 SPRED1Q7Z699 444 aa18.86■□□□□ 0.61
TPM4-204ENST00000586499 RNF10Q8N5U6 811 aaKnown RBP18.86■□□□□ 0.61
TPM4-204ENST00000586499 TRAM1L1Q8N609 369 aa18.86■□□□□ 0.61
TPM4-204ENST00000586499 GLYATL1Q969I3 302 aa18.86■□□□□ 0.61
TPM4-204ENST00000586499 SRPK1Q96SB4 655 aaKnown RBP18.86■□□□□ 0.61
TPM4-204ENST00000586499 APOL2Q9BQE5 337 aa18.86■□□□□ 0.61
TPM4-204ENST00000586499 OR2AG1Q9H205 316 aa18.86■□□□□ 0.61
TPM4-204ENST00000586499 POLR1BQ9H9Y6 1135 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms