RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 PHPT1Q9NRX4 125 aaPredicted RBP8.6□□□□□ -1.03
ATG4D-202ENST00000585437 SEPT10Q9P0V9 454 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 TRHDEQ9UKU6 1024 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 SLC17A4Q9Y2C5 497 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 ADAMTS20P59510 1910 aa8.6□□□□□ -1.03
ATG4D-202ENST00000585437 ITPR1Q14643 2758 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 CHD6Q8TD26 2715 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 EME2A4GXA9 379 aaPredicted RBP8.59□□□□□ -1.03
ATG4D-202ENST00000585437 RGSL1A5PLK6 1076 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 GOLGA8CPA6NN73 597 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 YY2O15391 372 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 TJP3O95049 919 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 EPOP01588 193 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 FGGP02679 453 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 RBP3P10745 1247 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 RBL1P28749 1068 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 CETN2P41208 172 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 SPINT3P49223 89 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 INSM1Q01101 510 aaPredicted RBP8.59□□□□□ -1.03
ATG4D-202ENST00000585437 C1orf61Q13536 156 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 HES3Q5TGS1 186 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 CDCP2Q5VXM1 449 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 DENND2CQ68D51 928 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 RAET1GQ6H3X3 334 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 GUSBP11Q6P575 273 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 LYSMD3Q7Z3D4 306 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 TMC3Q7Z5M5 1100 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 ARL10Q8N8L6 244 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 DCBLD1Q8N8Z6 715 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 PTCD2Q8WV60 388 aaKnown RBP8.59□□□□□ -1.03
ATG4D-202ENST00000585437 SCAMP4Q969E2 229 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 MRGPRX2Q96LB1 330 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 RUFY1Q96T51 708 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 AGAP2Q99490 1192 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 FAM129AQ9BZQ8 928 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 GBA3Q9H227 469 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 MRPL40Q9NQ50 206 aaKnown RBP8.59□□□□□ -1.03
ATG4D-202ENST00000585437 TRNAU1APQ9NX07 287 aaKnown RBP8.59□□□□□ -1.03
ATG4D-202ENST00000585437 SMARCAL1Q9NZC9 954 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 DKK4Q9UBT3 224 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 FAM153AQ9UHL3 310 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 DMGDHQ9UI17 866 aaKnown RBP8.59□□□□□ -1.03
ATG4D-202ENST00000585437 CD84Q9UIB8 345 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 UTP11Q9Y3A2 253 aaKnown RBP8.59□□□□□ -1.03
ATG4D-202ENST00000585437 ZNF711Q9Y462 761 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 ST14Q9Y5Y6 855 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 KIF26BQ2KJY2 2108 aa8.59□□□□□ -1.03
ATG4D-202ENST00000585437 ANKRD11Q6UB99 2663 aaPredicted RBP8.58□□□□□ -1.04
ATG4D-202ENST00000585437 DSPP15924 2871 aaKnown RBP8.58□□□□□ -1.04
ATG4D-202ENST00000585437 FAM187AA6NFU0 413 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 FADS2P1A8MWK0 482 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 RAD51CO43502 376 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 PHF2O75151 1096 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 ZNF189O75820 626 aaPredicted RBP8.58□□□□□ -1.04
ATG4D-202ENST00000585437 TNFP01375 233 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 IVLP07476 585 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 ANXA6P08133 673 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 MYF5P13349 255 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 CTSEP14091 401 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 HLA-DPA1P20036 260 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 OAS2P29728 719 aaKnown RBP8.58□□□□□ -1.04
ATG4D-202ENST00000585437 HMGCLP35914 325 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 GPR1P46091 355 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 DUSP3P51452 185 aaPredicted RBP8.58□□□□□ -1.04
ATG4D-202ENST00000585437 WNT3AP56704 352 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 EIF3EP60228 445 aaKnown RBP8.58□□□□□ -1.04
ATG4D-202ENST00000585437 DAB2P98082 770 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 E2F1Q01094 437 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 GUCY2DQ02846 1103 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 MPP3Q13368 585 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 PCSK7Q16549 785 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 SIRPB2Q5JXA9 342 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 OGFOD3Q6PK18 319 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 C17orf82Q86X59 251 aaPredicted RBP8.58□□□□□ -1.04
ATG4D-202ENST00000585437 GKN2Q86XP6 184 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 CDKL3Q8IVW4 592 aaPredicted RBP8.58□□□□□ -1.04
ATG4D-202ENST00000585437 KLHL7Q8IXQ5 586 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 KYQ8NBH2 561 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 GPR156Q8NFN8 814 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 SLC35B2Q8TB61 432 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 IFI44Q8TCB0 444 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 GPBAR1Q8TDU6 330 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 LRRC45Q96CN5 670 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 SRPK1Q96SB4 655 aaKnown RBP8.58□□□□□ -1.04
ATG4D-202ENST00000585437 RIOK2Q9BVS4 552 aaKnown RBP8.58□□□□□ -1.04
ATG4D-202ENST00000585437 TMEM168Q9H0V1 697 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 CDH19Q9H159 772 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 ZFYVE1Q9HBF4 777 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 EPB41L5Q9HCM4 733 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 CYP4F12Q9HCS2 524 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 FAM114A2Q9NRY5 505 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 EVA1BQ9NVM1 165 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 UBP1Q9NZI7 540 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 PKD2L2Q9NZM6 624 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 VPS18Q9P253 973 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 KLHL8Q9P2G9 620 aaPredicted RBP8.58□□□□□ -1.04
ATG4D-202ENST00000585437 CNOT6Q9ULM6 557 aaKnown RBP8.58□□□□□ -1.04
ATG4D-202ENST00000585437 SPO11Q9Y5K1 396 aa8.58□□□□□ -1.04
ATG4D-202ENST00000585437 PIKFYVEQ9Y2I7 2098 aa8.57□□□□□ -1.04
ATG4D-202ENST00000585437 TCRBV7S2A1N4TA0A589 114 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms