RNA–Protein interactions for RNA: ENST00000582104.5

SNX11-210, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-210ENST00000582104 LHCGRP22888 699 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 ELK3P41970 407 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 NPY2RP49146 381 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 CSNK1EP49674 416 aaKnown RBP13.24□□□□□ -0.29
SNX11-210ENST00000582104 TAS2R38P59533 333 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 SARNPP82979 210 aaKnown RBP13.24□□□□□ -0.29
SNX11-210ENST00000582104 RALGDSQ12967 914 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 CFAP58Q5T655 872 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 ARHGAP40Q5TG30 622 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 AGBL4Q5VU57 503 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 FAM46CQ5VWP2 391 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 CRTC1Q6UUV9 634 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 CES3Q6UWW8 571 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 ERN2Q76MJ5 926 aaKnown RBP13.24□□□□□ -0.29
SNX11-210ENST00000582104 PDIK1LQ8N165 341 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 TTC30BQ8N4P2 665 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 PAF1Q8N7H5 531 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 BLOC1S5Q8TDH9 187 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 TTC9Q92623 222 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 SIPA1Q96FS4 1042 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 ZNF778Q96MU6 729 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 HDAC8Q9BY41 377 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 TRIM4Q9C037 500 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 CPNE5Q9HCH3 593 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 USP36Q9P275 1121 aaKnown RBP13.24□□□□□ -0.29
SNX11-210ENST00000582104 MTRF1LQ9UGC7 380 aaKnown RBP13.24□□□□□ -0.29
SNX11-210ENST00000582104 IL17BQ9UHF5 180 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 CHMP2BQ9UQN3 213 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 ZNF711Q9Y462 761 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 TEX264Q9Y6I9 313 aa13.24□□□□□ -0.29
SNX11-210ENST00000582104 NOTCH2Q04721 2471 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 TP53BP1Q12888 1972 aaPredicted RBP13.23□□□□□ -0.29
SNX11-210ENST00000582104 AHCTF1Q8WYP5 2266 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 SDR42E2A6NKP2 422 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 LDB2O43679 373 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 ADRB3P13945 408 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 CCT8P50990 548 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 NEK3P51956 506 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 TMPRSS3P57727 454 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 SEPT6Q14141 434 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 TBC1D25Q3MII6 688 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 HES3Q5TGS1 186 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.23□□□□□ -0.29
SNX11-210ENST00000582104 RFLNAQ6ZTI6 216 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 LYSMD3Q7Z3D4 306 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 PRICKLE2Q7Z3G6 844 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 TTC7BQ86TV6 843 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 ZBED8Q8IZ13 594 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 FAM131CQ96AQ9 280 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 SCRN2Q96FV2 425 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 MED8Q96G25 268 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 C9orf72Q96LT7 481 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 FRMD8Q9BZ67 464 aaPredicted RBP13.23□□□□□ -0.29
SNX11-210ENST00000582104 FOXP3Q9BZS1 431 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 MAGEE1Q9HCI5 957 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 CHRAC1Q9NRG0 131 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 FBXL12Q9NXK8 326 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 BFARQ9NZS9 450 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 SLC2A6Q9UGQ3 507 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 TCAF1Q9Y4C2 921 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 ARL5AQ9Y689 179 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 LRRK2Q5S007 2527 aa13.23□□□□□ -0.29
SNX11-210ENST00000582104 A0A1W2PQ67 120 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 CCL22O00626 93 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 EIF3HO15372 352 aaKnown RBP eCLIP13.22□□□□□ -0.29
SNX11-210ENST00000582104 RFPL3O75679 317 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 RNASEH2AO75792 299 aaKnown RBP13.22□□□□□ -0.29
SNX11-210ENST00000582104 CLDN7O95471 211 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 SLC4A1P02730 911 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 DNTTP04053 509 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 C1SP09871 688 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 GM2AP17900 193 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 NMBRP28336 390 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 VIPR1P32241 457 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 MMP12P39900 470 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 MAGEA4P43358 317 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 TNNT3P45378 269 aaPredicted RBP13.22□□□□□ -0.29
SNX11-210ENST00000582104 AFF3P51826 1226 aaKnown RBP13.22□□□□□ -0.29
SNX11-210ENST00000582104 POLR2LP62875 67 aaKnown RBP13.22□□□□□ -0.29
SNX11-210ENST00000582104 CNGA3Q16281 694 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 DNAJC21Q5F1R6 531 aaKnown RBP13.22□□□□□ -0.29
SNX11-210ENST00000582104 LRRC66Q68CR7 880 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 FBXL19Q6PCT2 694 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 USP45Q70EL2 814 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 CENPUQ71F23 418 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 DPPA4Q7L190 304 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 TMC3Q7Z5M5 1100 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 FBXO36Q8NEA4 188 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 STAMBPL1Q96FJ0 436 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 CFAP36Q96G28 342 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 PPP1R16AQ96I34 528 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 RANBP9Q96S59 729 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 LYSMD1Q96S90 227 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 EBNA1BP2Q99848 306 aaKnown RBP13.22□□□□□ -0.29
SNX11-210ENST00000582104 KIFC1Q9BW19 673 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 IL22Q9GZX6 179 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 ITM2CQ9NQX7 267 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 DYRK4Q9NR20 520 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 NINJ2Q9NZG7 142 aa13.22□□□□□ -0.29
SNX11-210ENST00000582104 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms