RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 SIRPB2Q5JXA9 342 aa19.35■□□□□ 0.69
SREBF1-220ENST00000581707 ALS2CLQ60I27 953 aa19.35■□□□□ 0.69
SREBF1-220ENST00000581707 Q8N9G6 341 aaPredicted RBP19.35■□□□□ 0.69
SREBF1-220ENST00000581707 GPR26Q8NDV2 337 aa19.35■□□□□ 0.69
SREBF1-220ENST00000581707 ATXN7L3BQ96GX2 97 aa19.35■□□□□ 0.69
SREBF1-220ENST00000581707 OXNAD1Q96HP4 312 aaPredicted RBP19.35■□□□□ 0.69
SREBF1-220ENST00000581707 MRGPRX2Q96LB1 330 aa19.35■□□□□ 0.69
SREBF1-220ENST00000581707 GFM1Q96RP9 751 aaKnown RBP19.35■□□□□ 0.69
SREBF1-220ENST00000581707 POLR1BQ9H9Y6 1135 aa19.35■□□□□ 0.69
SREBF1-220ENST00000581707 VPS18Q9P253 973 aa19.35■□□□□ 0.69
SREBF1-220ENST00000581707 RSPH14Q9UHP6 348 aa19.35■□□□□ 0.69
SREBF1-220ENST00000581707 ZNHIT2Q9UHR6 403 aa19.35■□□□□ 0.69
SREBF1-220ENST00000581707 SPO11Q9Y5K1 396 aa19.35■□□□□ 0.69
SREBF1-220ENST00000581707 RNF215Q9Y6U7 377 aa19.35■□□□□ 0.69
SREBF1-220ENST00000581707 ZFC3H1O60293 1989 aaKnown RBP19.34■□□□□ 0.69
SREBF1-220ENST00000581707 MIF4GDA9UHW6 222 aaKnown RBP19.34■□□□□ 0.69
SREBF1-220ENST00000581707 NUDT21O43809 227 aaKnown RBP19.34■□□□□ 0.69
SREBF1-220ENST00000581707 FTCDO95954 541 aa19.34■□□□□ 0.69
SREBF1-220ENST00000581707 RPLP0P05388 317 aaKnown RBP19.34■□□□□ 0.69
SREBF1-220ENST00000581707 RBP3P10745 1247 aa19.34■□□□□ 0.69
SREBF1-220ENST00000581707 ACTN2P35609 894 aa19.34■□□□□ 0.69
SREBF1-220ENST00000581707 ACTR1BP42025 376 aa19.34■□□□□ 0.69
SREBF1-220ENST00000581707 LSSP48449 732 aa19.34■□□□□ 0.69
SREBF1-220ENST00000581707 GSDMDP57764 484 aa19.34■□□□□ 0.69
SREBF1-220ENST00000581707 DCDC1P59894 354 aa19.34■□□□□ 0.69
SREBF1-220ENST00000581707 ACTR1AP61163 376 aa19.34■□□□□ 0.69
SREBF1-220ENST00000581707 GABREP78334 506 aa19.34■□□□□ 0.69
SREBF1-220ENST00000581707 MPP3Q13368 585 aa19.34■□□□□ 0.69
SREBF1-220ENST00000581707 DARS2Q6PI48 645 aaKnown RBP19.34■□□□□ 0.69
SREBF1-220ENST00000581707 C17orf82Q86X59 251 aaPredicted RBP19.34■□□□□ 0.69
SREBF1-220ENST00000581707 CCNJLQ8IV13 435 aa19.34■□□□□ 0.69
SREBF1-220ENST00000581707 CDKL3Q8IVW4 592 aaPredicted RBP19.34■□□□□ 0.69
SREBF1-220ENST00000581707 SLC25A41Q8N5S1 370 aa19.34■□□□□ 0.69
SREBF1-220ENST00000581707 IPMKQ8NFU5 416 aa19.34■□□□□ 0.69
SREBF1-220ENST00000581707 FAM118BQ9BPY3 351 aa19.34■□□□□ 0.69
SREBF1-220ENST00000581707 ZSCAN5AQ9BUG6 496 aa19.34■□□□□ 0.69
SREBF1-220ENST00000581707 LRRN3Q9H3W5 708 aa19.34■□□□□ 0.69
SREBF1-220ENST00000581707 TRABDQ9H4I3 376 aa19.34■□□□□ 0.69
SREBF1-220ENST00000581707 NFKBIL1Q9UBC1 381 aaPredicted RBP19.34■□□□□ 0.69
SREBF1-220ENST00000581707 KIF26BQ2KJY2 2108 aa19.34■□□□□ 0.69
SREBF1-220ENST00000581707 ITPR1Q14643 2758 aa19.33■□□□□ 0.69
SREBF1-220ENST00000581707 A0A1W2PQM1 296 aa19.33■□□□□ 0.68
SREBF1-220ENST00000581707 AURKAO14965 403 aa19.33■□□□□ 0.68
SREBF1-220ENST00000581707 TLX3O43711 291 aaPredicted RBP19.33■□□□□ 0.68
SREBF1-220ENST00000581707 DNAJC6O75061 913 aa19.33■□□□□ 0.68
SREBF1-220ENST00000581707 ECEL1O95672 775 aa19.33■□□□□ 0.68
SREBF1-220ENST00000581707 PTMAP06454 111 aaKnown RBP19.33■□□□□ 0.68
SREBF1-220ENST00000581707 BPIP17213 487 aa19.33■□□□□ 0.68
SREBF1-220ENST00000581707 CHRNA4P43681 627 aa19.33■□□□□ 0.68
SREBF1-220ENST00000581707 MAZP56270 477 aaKnown RBP19.33■□□□□ 0.68
SREBF1-220ENST00000581707 LRP8Q14114 963 aa19.33■□□□□ 0.68
SREBF1-220ENST00000581707 ZNF569Q5MCW4 686 aa19.33■□□□□ 0.68
SREBF1-220ENST00000581707 ITPRIPL1Q6GPH6 555 aa19.33■□□□□ 0.68
SREBF1-220ENST00000581707 LSMEM2Q8N112 164 aa19.33■□□□□ 0.68
SREBF1-220ENST00000581707 FGF11Q92914 225 aa19.33■□□□□ 0.68
SREBF1-220ENST00000581707 GBA3Q9H227 469 aa19.33■□□□□ 0.68
SREBF1-220ENST00000581707 RMI1Q9H9A7 625 aa19.33■□□□□ 0.68
SREBF1-220ENST00000581707 PACSIN2Q9UNF0 486 aaPredicted RBP19.33■□□□□ 0.68
SREBF1-220ENST00000581707 ZFHX4Q86UP3 3567 aa19.33■□□□□ 0.68
SREBF1-220ENST00000581707 ZFYVE26Q68DK2 2539 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 FAM208BQ5VWN6 2430 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 A0A087WV48 116 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 RHPN2P1A8MT19 583 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 DDX3YO15523 660 aaKnown RBP19.32■□□□□ 0.68
SREBF1-220ENST00000581707 KCNN4O15554 427 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 STK10O94804 968 aaKnown RBP19.32■□□□□ 0.68
SREBF1-220ENST00000581707 SLC25A14O95258 325 aaPredicted RBP19.32■□□□□ 0.68
SREBF1-220ENST00000581707 HLA-DPA1P20036 260 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 PDX1P52945 283 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 GEMP55040 296 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 SLC1A5Q15758 541 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 TBC1D25Q3MII6 688 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 C3orf38Q5JPI3 329 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 PDPK2PQ6A1A2 396 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 C19orf48Q6RUI8 117 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 SPRED1Q7Z699 444 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 NAGSQ8N159 534 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 ARL14Q8N4G2 192 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 RNF10Q8N5U6 811 aaKnown RBP19.32■□□□□ 0.68
SREBF1-220ENST00000581707 TRAM1L1Q8N609 369 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 HNRNPLLQ8WVV9 542 aaKnown RBP19.32■□□□□ 0.68
SREBF1-220ENST00000581707 PATE1Q8WXA2 126 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 DCBLD2Q96PD2 775 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 FSD1LQ9BXM9 530 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 BPIFA1Q9NP55 256 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 HACD3Q9P035 362 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 SATB2Q9UPW6 733 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 PRKAB1Q9Y478 270 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 PCYT1BQ9Y5K3 369 aaPredicted RBP19.32■□□□□ 0.68
SREBF1-220ENST00000581707 ADGRG1Q9Y653 693 aa19.32■□□□□ 0.68
SREBF1-220ENST00000581707 ADAMTS20P59510 1910 aa19.31■□□□□ 0.68
SREBF1-220ENST00000581707 A0A1W2PNU3 283 aaPredicted RBP19.31■□□□□ 0.68
SREBF1-220ENST00000581707 GOLGA6L9A6NEM1 432 aa19.31■□□□□ 0.68
SREBF1-220ENST00000581707 D6RAR5 112 aa19.31■□□□□ 0.68
SREBF1-220ENST00000581707 ANXA9O76027 345 aa19.31■□□□□ 0.68
SREBF1-220ENST00000581707 DXOO77932 396 aaKnown RBP19.31■□□□□ 0.68
SREBF1-220ENST00000581707 HMGCLP35914 325 aa19.31■□□□□ 0.68
SREBF1-220ENST00000581707 EIF2S3P41091 472 aaKnown RBP19.31■□□□□ 0.68
SREBF1-220ENST00000581707 BIRC2Q13490 618 aa19.31■□□□□ 0.68
SREBF1-220ENST00000581707 ANKRD20A2Q5SQ80 823 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms