RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 ACTL8Q9H568 366 aa11.07□□□□□ -0.64
SUPT4H1-203ENST00000579289 PHPT1Q9NRX4 125 aaPredicted RBP11.07□□□□□ -0.64
SUPT4H1-203ENST00000579289 ASF1BQ9NVP2 202 aa11.07□□□□□ -0.64
SUPT4H1-203ENST00000579289 SEMA5BQ9P283 1151 aa11.07□□□□□ -0.64
SUPT4H1-203ENST00000579289 UBA2Q9UBT2 640 aaPredicted RBP11.07□□□□□ -0.64
SUPT4H1-203ENST00000579289 CNOT6Q9ULM6 557 aaKnown RBP11.07□□□□□ -0.64
SUPT4H1-203ENST00000579289 SLC30A1Q9Y6M5 507 aa11.07□□□□□ -0.64
SUPT4H1-203ENST00000579289 FBN3Q75N90 2809 aa11.07□□□□□ -0.64
SUPT4H1-203ENST00000579289 TTC24A2A3L6 582 aaPredicted RBP11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 PIPSLA2A3N6 862 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 GOLGA8SH3BPF8 625 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 HNRNPRO43390 633 aaKnown RBP11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 KATNA1O75449 491 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 NDUFA10O95299 355 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 MMEP08473 750 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 MAN1A1P33908 653 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 SOX5P35711 763 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 EPHA4P54764 986 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 JAM2P57087 298 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 SNX16P57768 344 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 UBE2IP63279 158 aaKnown RBP11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 HHEXQ03014 270 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 UBXN1Q04323 297 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 NSUN2Q08J23 767 aaKnown RBP eCLIP11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 IHHQ14623 411 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 CDO1Q16878 200 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 PLEKHN1Q494U1 663 aaPredicted RBP11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 FAM199XQ6PEV8 388 aaPredicted RBP11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 ARHGAP36Q6ZRI8 547 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 TSPAN33Q86UF1 283 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 ARHGAP12Q8IWW6 846 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 FDCSPQ8NFU4 85 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 EPS8L1Q8TE68 723 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 SLC20A1Q8WUM9 679 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 KLHL6Q8WZ60 621 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 POM121Q96HA1 1249 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 SMIM14Q96QK8 99 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 OR2M4Q96R27 311 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 OR6C1Q96RD1 312 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 MCCC1Q96RQ3 725 aaPredicted RBP11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 WDR24Q96S15 920 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 ING2Q9H160 280 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 METTL5Q9NRN9 209 aaKnown RBP11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 SCHIP1Q9P0W5 487 aaPredicted RBP11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 KLHL3Q9UH77 587 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 PCDHGB7Q9Y5F8 929 aa11.06□□□□□ -0.64
SUPT4H1-203ENST00000579289 TCRBV5S1A1TA0A578 114 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 NPIPB15A6NHN6 443 aaPredicted RBP11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 C21orf140B9A014 251 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 KIF1CO43896 1103 aaKnown RBP11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 PEX11BO96011 259 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 CHRNB2P17787 502 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 LPOP22079 712 aaPredicted RBP11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 SERPINA4P29622 427 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 GARSP41250 739 aaKnown RBP11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 LEPRP48357 1165 aaKnown RBP11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 CCL11P51671 97 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 NFATC2Q13469 925 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 IL11RAQ14626 422 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 ZRANB3Q5FWF4 1079 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 NAA35Q5VZE5 725 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 SP5Q6BEB4 398 aaPredicted RBP11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 ADAMTSL4Q6UY14 1074 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 TRIM74Q86UV6 250 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 TP53INP2Q8IXH6 220 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 CCDC168Q8NDH2 2452 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 NEK11Q8NG66 645 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 CPA5Q8WXQ8 436 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 THAP4Q8WY91 577 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 AHCYL2Q96HN2 611 aaKnown RBP11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 C5orf34Q96MH7 638 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 ERGIC2Q96RQ1 377 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 SMAD5Q99717 465 aaKnown RBP11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 NCAPGQ9BPX3 1015 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 BPIFA3Q9BQP9 254 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 MFRPQ9BY79 579 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 SLC39A8Q9C0K1 460 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 ABCG8Q9H221 673 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 ATP13A3Q9H7F0 1226 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 NOCTQ9UK39 431 aaKnown RBP11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 PADI1Q9ULC6 663 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 PPIL1Q9Y3C6 166 aa11.05□□□□□ -0.64
SUPT4H1-203ENST00000579289 NIPBLQ6KC79 2804 aaeCLIP11.04□□□□□ -0.64
SUPT4H1-203ENST00000579289 LILRA5A6NI73 299 aa11.04□□□□□ -0.64
SUPT4H1-203ENST00000579289 ARGFXA6NJG6 315 aa11.04□□□□□ -0.64
SUPT4H1-203ENST00000579289 TOX3O15405 576 aaPredicted RBP11.04□□□□□ -0.64
SUPT4H1-203ENST00000579289 LSM8O95777 96 aaKnown RBP11.04□□□□□ -0.64
SUPT4H1-203ENST00000579289 CYP1A1P04798 512 aaPredicted RBP11.04□□□□□ -0.64
SUPT4H1-203ENST00000579289 CAPN1P07384 714 aa11.04□□□□□ -0.64
SUPT4H1-203ENST00000579289 MMP8P22894 467 aa11.04□□□□□ -0.64
SUPT4H1-203ENST00000579289 PTPN4P29074 926 aa11.04□□□□□ -0.64
SUPT4H1-203ENST00000579289 EPHB2P29323 1055 aa11.04□□□□□ -0.64
SUPT4H1-203ENST00000579289 HNRNPH3P31942 346 aaKnown RBP11.04□□□□□ -0.64
SUPT4H1-203ENST00000579289 VIPR1P32241 457 aa11.04□□□□□ -0.64
SUPT4H1-203ENST00000579289 PTGIRP43119 386 aa11.04□□□□□ -0.64
SUPT4H1-203ENST00000579289 ZNF165P49910 485 aa11.04□□□□□ -0.64
SUPT4H1-203ENST00000579289 PAPOLAP51003 745 aaKnown RBP11.04□□□□□ -0.64
SUPT4H1-203ENST00000579289 ITGA1P56199 1179 aa11.04□□□□□ -0.64
SUPT4H1-203ENST00000579289 FMO1Q01740 532 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms