RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 K7ENP7 123 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 ERVH48-1M5A8F1 160 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 SPOPO43791 374 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 CD1CP29017 333 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 MAGEA1P43355 309 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 TEX44Q53QW1 395 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 INO80CQ6PI98 192 aaPredicted RBP15.75■□□□□ 0.11
CRLF3-203ENST00000578692 ZNF574Q6ZN55 896 aaPredicted RBP15.75■□□□□ 0.11
CRLF3-203ENST00000578692 CCDC81Q6ZN84 652 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 B4GALNT4Q76KP1 1039 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 BZW1Q7L1Q6 419 aaKnown RBP15.75■□□□□ 0.11
CRLF3-203ENST00000578692 CHST15Q7LFX5 561 aaPredicted RBP15.75■□□□□ 0.11
CRLF3-203ENST00000578692 LYSMD3Q7Z3D4 306 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 EID2BQ96D98 161 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 TRIB3Q96RU7 358 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 NUDT22Q9BRQ3 303 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 SLC25A51Q9H1U9 297 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 WDR70Q9NW82 654 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 AKAP7Q9P0M2 348 aaPredicted RBP15.75■□□□□ 0.11
CRLF3-203ENST00000578692 ACSL6Q9UKU0 697 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 PRKAB1Q9Y478 270 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 OAS3Q9Y6K5 1087 aaKnown RBP15.75■□□□□ 0.11
CRLF3-203ENST00000578692 SCN8AQ9UQD0 1980 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 FADS2P1A8MWK0 482 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 ETV5P41161 510 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 NOP2P46087 812 aaKnown RBP15.75■□□□□ 0.11
CRLF3-203ENST00000578692 NR2C2P49116 596 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 MAPK10P53779 464 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 CDK18Q07002 472 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 C19orf57Q0VDD7 668 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 SQSTM1Q13501 440 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 C16orf72Q14CZ0 275 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 PCSK7Q16549 785 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 TAF1BQ53T94 588 aaPredicted RBP15.75■□□□□ 0.11
CRLF3-203ENST00000578692 PCSK4Q6UW60 755 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 USP7Q93009 1102 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 CCNL2Q96S94 520 aaPredicted RBP15.75■□□□□ 0.11
CRLF3-203ENST00000578692 TRIM5Q9C035 493 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 RMI1Q9H9A7 625 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 MAGEE1Q9HCI5 957 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 SHOC2Q9UQ13 582 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 PCYT1BQ9Y5K3 369 aaPredicted RBP15.75■□□□□ 0.11
CRLF3-203ENST00000578692 ALG6Q9Y672 507 aa15.75■□□□□ 0.11
CRLF3-203ENST00000578692 IGHV1OR21-1A0A087WYE8 117 aa15.74■□□□□ 0.11
CRLF3-203ENST00000578692 IGHV5-10-1A0A0J9YXX1 117 aa15.74■□□□□ 0.11
CRLF3-203ENST00000578692 MT-CYBP00156 380 aaPredicted RBP15.74■□□□□ 0.11
CRLF3-203ENST00000578692 PIRTP0C851 137 aa15.74■□□□□ 0.11
CRLF3-203ENST00000578692 CDKN2BP42772 138 aa15.74■□□□□ 0.11
CRLF3-203ENST00000578692 FASLGP48023 281 aa15.74■□□□□ 0.11
CRLF3-203ENST00000578692 LIMK2P53671 638 aa15.74■□□□□ 0.11
CRLF3-203ENST00000578692 HADHBP55084 474 aaKnown RBP15.74■□□□□ 0.11
CRLF3-203ENST00000578692 TFDP2Q14188 446 aa15.74■□□□□ 0.11
CRLF3-203ENST00000578692 TGIF1Q15583 401 aa15.74■□□□□ 0.11
CRLF3-203ENST00000578692 NKAIN2Q5VXU1 208 aa15.74■□□□□ 0.11
CRLF3-203ENST00000578692 CCDC70Q6NSX1 233 aa15.74■□□□□ 0.11
CRLF3-203ENST00000578692 TMC3Q7Z5M5 1100 aa15.74■□□□□ 0.11
CRLF3-203ENST00000578692 TC2NQ8N9U0 490 aa15.74■□□□□ 0.11
CRLF3-203ENST00000578692 GPR26Q8NDV2 337 aa15.74■□□□□ 0.11
CRLF3-203ENST00000578692 SPATA22Q8NHS9 363 aa15.74■□□□□ 0.11
CRLF3-203ENST00000578692 TADA1Q96BN2 335 aa15.74■□□□□ 0.11
CRLF3-203ENST00000578692 WBP1Q96G27 269 aa15.74■□□□□ 0.11
CRLF3-203ENST00000578692 SPATA16Q9BXB7 569 aa15.74■□□□□ 0.11
CRLF3-203ENST00000578692 GLOD4Q9HC38 313 aa15.74■□□□□ 0.11
CRLF3-203ENST00000578692 KCNK4Q9NYG8 393 aa15.74■□□□□ 0.11
CRLF3-203ENST00000578692 SAE1Q9UBE0 346 aaPredicted RBP15.74■□□□□ 0.11
CRLF3-203ENST00000578692 A0A0A6YYK5 440 aaPredicted RBP15.73■□□□□ 0.11
CRLF3-203ENST00000578692 PRAMEF33A0A0G2JMD5 474 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 HGSO14964 777 aaPredicted RBP15.73■□□□□ 0.11
CRLF3-203ENST00000578692 EFSO43281 561 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 CST8O60676 142 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 PRAMEF10O60809 474 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 EML2O95834 649 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 LLGL1Q15334 1064 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 SLC14A2Q15849 920 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 TAZQ16635 292 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 TMEM164Q5U3C3 297 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 KAZNQ674X7 775 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 SARM1Q6SZW1 724 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 SFRP1Q8N474 314 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 RCBTB1Q8NDN9 531 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 OR4D9Q8NGE8 314 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 SLC37A2Q8TED4 501 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 TFB1MQ8WVM0 346 aaKnown RBP15.73■□□□□ 0.11
CRLF3-203ENST00000578692 TEKT5Q96M29 485 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 SLC38A3Q99624 504 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 DPYSL5Q9BPU6 564 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 GPR63Q9BZJ6 419 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 B3GNT4Q9C0J1 378 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 CARD9Q9H257 536 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 RAD18Q9NS91 495 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 ATXN10Q9UBB4 475 aa15.73■□□□□ 0.11
CRLF3-203ENST00000578692 ZFC3H1O60293 1989 aaKnown RBP15.73■□□□□ 0.11
CRLF3-203ENST00000578692 C9orf172C9J069 976 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 GRID2O43424 1007 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 PSTPIP1O43586 416 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 NUAK1O60285 661 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 C1QL1O75973 258 aa15.72■□□□□ 0.11
CRLF3-203ENST00000578692 ZRANB2O95218 330 aaKnown RBP eCLIP15.72■□□□□ 0.11
CRLF3-203ENST00000578692 SLC25A14O95258 325 aaPredicted RBP15.72■□□□□ 0.11
CRLF3-203ENST00000578692 NDST3O95803 873 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms