RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 ARNTP27540 789 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 NMBRP28336 390 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ACSL1P33121 698 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PXNP49023 591 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 GPX6P59796 221 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 IRX4P78413 519 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CRADDP78560 199 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 FASTKD3Q14CZ7 662 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 UAP1L1Q3KQV9 507 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 POM121L1PQ3SYA9 428 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 MAP9Q49MG5 647 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 USP39Q53GS9 565 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PDPK2PQ6A1A2 396 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 KIAA0930Q6ICG6 404 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ESRP1Q6NXG1 681 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 KIAA1324Q6UXG2 1013 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SLC36A4Q6YBV0 504 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 UNC5AQ6ZN44 842 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 C3orf62Q6ZUJ4 267 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 HSD11B1LQ7Z5J1 315 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 HORMAD1Q86X24 394 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ZBED8Q8IZ13 594 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 OR4K2Q8NGD2 314 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 GPR150Q8NGU9 434 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 OR14C36Q8NHC7 312 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 CENPTQ96BT3 561 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 MFSD3Q96ES6 412 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 DTD2Q96FN9 168 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 GPR63Q9BZJ6 419 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 IL26Q9NPH9 171 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PKD2L2Q9NZM6 624 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 SAMD15Q9P1V8 674 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 ZC3H7BQ9UGR2 993 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 APPL1Q9UKG1 709 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 PKP3Q9Y446 797 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 RPS6KL1Q9Y6S9 549 aa11.09□□□□□ -0.63
CDK5RAP3-204ENST00000577664 TRBV5-4A0A0C4DH59 114 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 GAPDHSO14556 408 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 WNT9AO14904 365 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 STX7O15400 261 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 RNGTTO60942 597 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 BANF1O75531 89 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TM7SF2O76062 418 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SEMA4FO95754 770 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ABHD2P08910 425 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ELFN1P0C7U0 828 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 C6P13671 934 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 H2AFXP16104 143 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PAMP19021 973 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TRIM23P36406 574 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PMS2P54278 862 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 KCNC4Q03721 635 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PEX6Q13608 980 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CRYMQ14894 314 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 KYNUQ16719 465 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ZNF284Q2VY69 593 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 GPR33Q49SQ1 333 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 BEND6Q5SZJ8 279 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 HENMT1Q5T8I9 393 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 GALNT7Q86SF2 657 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 C11orf74Q86VG3 221 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CNTN4Q8IWV2 1026 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PALM2Q8IXS6 379 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CNPY4Q8N129 248 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PGBD3Q8N328 593 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 GPR26Q8NDV2 337 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 GSDMBQ8TAX9 411 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CXorf40AQ8TE69 158 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TOE1Q96GM8 510 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 SLC17A9Q9BYT1 436 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 EPB41L4BQ9H329 900 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CDC42EP4Q9H3Q1 356 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 CD93Q9NPY3 652 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 NINJ2Q9NZG7 142 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 BCCIPQ9P287 314 aaKnown RBP eCLIP11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 FETUBQ9UGM5 382 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 GGT7Q9UJ14 662 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ITM2BQ9Y287 266 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 KCTD3Q9Y597 815 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 MAD1L1Q9Y6D9 718 aa11.08□□□□□ -0.64
CDK5RAP3-204ENST00000577664 COL12A1Q99715 3063 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TBC1D3DA0A087WVF3 549 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TBC1D3IA0A087WXS9 549 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TBC1D3EA0A087X179 549 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TBC1D3KA0A087X1G2 549 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TBC1D3FA6NER0 549 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 IGLON5A6NGN9 336 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 METTL12A8MUP2 240 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PATE3B3GLJ2 98 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TBC1D3LB9A6J9 549 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 NEMP1O14524 444 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TOR1BO14657 336 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 RIPK2O43353 540 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 MMP20O60882 483 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ERLIN1O75477 346 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 RECQL5O94762 991 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 PYGLP06737 847 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 HOXC4P09017 264 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 TBC1D3HP0C7X1 549 aa11.07□□□□□ -0.64
CDK5RAP3-204ENST00000577664 ARSDP51689 593 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms