RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 CXADRP78310 365 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 UBXN1Q04323 297 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 TLE3Q04726 772 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 IRF4Q15306 451 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 CA9Q16790 459 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 KLHL40Q2TBA0 621 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 C3orf38Q5JPI3 329 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 CT47A1Q5JQC4 288 aaPredicted RBP6.27□□□□□ -1.41
NUP88-212ENST00000576708 FAXCQ5TGI0 409 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 ZCCHC8Q6NZY4 707 aaKnown RBP6.27□□□□□ -1.41
NUP88-212ENST00000576708 DNAJC24Q6P3W2 148 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 PCSK4Q6UW60 755 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 SPATC1Q76KD6 591 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 MON1BQ7L1V2 547 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 APTXQ7Z2E3 356 aaKnown RBP6.27□□□□□ -1.41
NUP88-212ENST00000576708 RD3Q7Z3Z2 195 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 ZSWIM9Q86XI8 627 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 DCP2Q8IU60 420 aaKnown RBP6.27□□□□□ -1.41
NUP88-212ENST00000576708 SLC35F3Q8IY50 421 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 C3orf20Q8ND61 904 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 CXorf40AQ8TE69 158 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 ASB12Q8WXK4 309 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 TSACCQ96A04 125 aaPredicted RBP6.27□□□□□ -1.41
NUP88-212ENST00000576708 NTAN1Q96AB6 310 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 FUBP1Q96AE4 644 aaKnown RBP6.27□□□□□ -1.41
NUP88-212ENST00000576708 RAB7BQ96AH8 199 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 ATXN7L3BQ96GX2 97 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 RCC1LQ96I51 464 aaKnown RBP6.27□□□□□ -1.41
NUP88-212ENST00000576708 CELF6Q96J87 481 aaKnown RBP6.27□□□□□ -1.41
NUP88-212ENST00000576708 NSMCE3Q96MG7 304 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 GDAP1L1Q96MZ0 367 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 MCEEQ96PE7 176 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 DEPDC7Q96QD5 511 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 SRPK1Q96SB4 655 aaKnown RBP6.27□□□□□ -1.41
NUP88-212ENST00000576708 LGMNQ99538 433 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.27□□□□□ -1.41
NUP88-212ENST00000576708 LRRC61Q9BV99 259 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 SLC12A9Q9BXP2 914 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 TRIM7Q9C029 511 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 CLPBQ9H078 707 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 HSD3B7Q9H2F3 369 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 SYNDIG1Q9H7V2 258 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 CPNE5Q9HCH3 593 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 AP5S1Q9NUS5 200 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 TMEM51Q9NW97 253 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 APOBEC3BQ9UH17 382 aaKnown RBP6.27□□□□□ -1.41
NUP88-212ENST00000576708 SATB2Q9UPW6 733 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 GPR55Q9Y2T6 319 aaPredicted RBP6.27□□□□□ -1.41
NUP88-212ENST00000576708 EMC9Q9Y3B6 208 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 BPTFQ12830 3046 aa6.27□□□□□ -1.41
NUP88-212ENST00000576708 TRPM6Q9BX84 2022 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 ATRXP46100 2492 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 COL27A1Q8IZC6 1860 aaPredicted RBP6.26□□□□□ -1.41
NUP88-212ENST00000576708 ACACAQ13085 2346 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 EME2A4GXA9 379 aaPredicted RBP6.26□□□□□ -1.41
NUP88-212ENST00000576708 ZSCAN5CA6NGD5 496 aaPredicted RBP6.26□□□□□ -1.41
NUP88-212ENST00000576708 A8MX80 341 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 TEX33O43247 280 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 TM7SF2O76062 418 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 ZNF205O95201 554 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 CALB1P05937 261 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 GP1BAP07359 652 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 TPM2P07951 284 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 ATP1A3P13637 1013 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 KRT10P13645 584 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 TSHRP16473 764 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 LSSP48449 732 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 PAPOLAP51003 745 aaKnown RBP6.26□□□□□ -1.41
NUP88-212ENST00000576708 DUSP3P51452 185 aaPredicted RBP6.26□□□□□ -1.41
NUP88-212ENST00000576708 GSCP56915 257 aaPredicted RBP6.26□□□□□ -1.41
NUP88-212ENST00000576708 GEMIN4P57678 1058 aaKnown RBP6.26□□□□□ -1.41
NUP88-212ENST00000576708 POU4F1Q01851 419 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 MYL5Q02045 173 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 RAD51Q06609 339 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 NR0B2Q15466 257 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 ISXQ2M1V0 245 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 ALG11Q2TAA5 492 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 WSCD2Q2TBF2 565 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 TMEM52BQ4KMG9 183 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 ACAD10Q6JQN1 1059 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 DCUN1D2Q6PH85 259 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 ENPP7Q6UWV6 458 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 ARHGAP36Q6ZRI8 547 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 ZNF662Q6ZS27 426 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 RBM43Q6ZSC3 357 aaKnown RBP6.26□□□□□ -1.41
NUP88-212ENST00000576708 GPR155Q7Z3F1 870 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 IRF2BP2Q7Z5L9 587 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 ZNF227Q86WZ6 799 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 CAMK1DQ8IU85 385 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 SFTPA2Q8IWL1 248 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 MCOLN2Q8IZK6 566 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 UMODL1-AS1Q8N2C9 162 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 ARFGAP1Q8N6T3 406 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 PLA2G15Q8NCC3 412 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 DENND6BQ8NEG7 585 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 PRR11Q96HE9 360 aaPredicted RBP6.26□□□□□ -1.41
NUP88-212ENST00000576708 HIC2Q96JB3 615 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 VCPIP1Q96JH7 1222 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 PEBP4Q96S96 227 aa6.26□□□□□ -1.41
NUP88-212ENST00000576708 IL12RB2Q99665 862 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms