RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 PRKACBP22694 351 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 CES1P23141 567 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 ATP5F1P24539 256 aaPredicted RBP9.54□□□□□ -0.88
CCDC40-212ENST00000574799 GTF2E2P29084 291 aaKnown RBP9.54□□□□□ -0.88
CCDC40-212ENST00000574799 POU6F1Q14863 301 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 SKIV2LQ15477 1246 aaKnown RBP9.54□□□□□ -0.88
CCDC40-212ENST00000574799 ZCCHC8Q6NZY4 707 aaKnown RBP9.54□□□□□ -0.88
CCDC40-212ENST00000574799 EPHX4Q8IUS5 362 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 LGI2Q8N0V4 545 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 ELMOD1Q8N336 334 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 PSD4Q8NDX1 1056 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 BEST2Q8NFU1 509 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 FBXO30Q8TB52 745 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 ATL1Q8WXF7 558 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.54□□□□□ -0.88
CCDC40-212ENST00000574799 SLC45A3Q96JT2 553 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 FCRL3Q96P31 734 aaPredicted RBP9.54□□□□□ -0.88
CCDC40-212ENST00000574799 HOPXQ9BPY8 73 aaPredicted RBP9.54□□□□□ -0.88
CCDC40-212ENST00000574799 TINF2Q9BSI4 451 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 MAGEB5Q9BZ81 275 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 ARMC1Q9NVT9 282 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 ADPRHL2Q9NX46 363 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 DTLQ9NZJ0 730 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 MFHAS1Q9Y4C4 1052 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 GPSM3Q9Y4H4 160 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 HAS3O00219 553 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 RGS5O15539 181 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 ADORA2BP29275 332 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 POLR2IP36954 125 aaKnown RBP9.54□□□□□ -0.88
CCDC40-212ENST00000574799 GPD2P43304 727 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 BCAT1P54687 386 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 LIPEQ05469 1076 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 INCA1Q0VD86 236 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 KRR1Q13601 381 aaKnown RBP9.54□□□□□ -0.88
CCDC40-212ENST00000574799 LRP8Q14114 963 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 GRIK4Q16099 956 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 FAM98BQ52LJ0 330 aaKnown RBP9.54□□□□□ -0.88
CCDC40-212ENST00000574799 GALNT12Q8IXK2 581 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 LEMD2Q8NC56 503 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 ITFG1Q8TB96 612 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 FAR1Q8WVX9 515 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 SGCDQ92629 289 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 ZNF560Q96MR9 790 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 B3GNT5Q9BYG0 378 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 IL22Q9GZX6 179 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 C2orf40Q9H1Z8 148 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 ALG2Q9H553 416 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 GPN2Q9H9Y4 310 aaPredicted RBP9.54□□□□□ -0.88
CCDC40-212ENST00000574799 ZC4H2Q9NQZ6 224 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 FBXO9Q9UK97 447 aaPredicted RBP9.54□□□□□ -0.88
CCDC40-212ENST00000574799 BOLA1Q9Y3E2 137 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 TLL2Q9Y6L7 1015 aa9.54□□□□□ -0.88
CCDC40-212ENST00000574799 EVPLLA8MZ36 301 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 CENPBD1B2RD01 187 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 NME4O00746 187 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 SOAT2O75908 522 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 FADS2O95864 444 aaKnown RBP9.53□□□□□ -0.88
CCDC40-212ENST00000574799 F2P00734 622 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 VDRP11473 427 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 BMP4P12644 408 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 GABRB3P28472 473 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 GRSF1Q12849 480 aaKnown RBP eCLIP9.53□□□□□ -0.88
CCDC40-212ENST00000574799 ATP6AP1Q15904 470 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 RABL3Q5HYI8 236 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 RFPL4BQ6ZWI9 263 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 LIMS2Q7Z4I7 341 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 ATP6V0D2Q8N8Y2 350 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 C12orf29Q8N999 325 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 TRPV1Q8NER1 839 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 ACVR1CQ8NER5 493 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 OR6B3Q8NGW1 331 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 NDNFQ8TB73 568 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 QKIQ96PU8 341 aaKnown RBP eCLIP9.53□□□□□ -0.88
CCDC40-212ENST00000574799 CSPG4P5Q96PW8 444 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 FEM1AQ9BSK4 669 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 ZNF408Q9H9D4 720 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 C8orf4Q9NR00 106 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 SNTG2Q9NY99 539 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 GIMAP2Q9UG22 337 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 WBP11Q9Y2W2 641 aaKnown RBP9.53□□□□□ -0.88
CCDC40-212ENST00000574799 U3KQV3 271 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 FAM172BPA6NC97 362 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 SLC22A1O15245 554 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 MTSS1O43312 755 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 RAB10P61026 200 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 NCS1P62166 190 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 CCNA1P78396 465 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 FAM110CQ1W6H9 321 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 CYBRD1Q53TN4 286 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 SNAP47Q5SQN1 464 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 ARMC4Q5T2S8 1044 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 CNSTQ6PJW8 725 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 RALGPS2Q86X27 583 aaPredicted RBP9.53□□□□□ -0.88
CCDC40-212ENST00000574799 SPARTQ8N0X7 666 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 PYROXD2Q8N2H3 581 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 KDM1BQ8NB78 822 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 IPMKQ8NFU5 416 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 SPPL2BQ8TCT7 592 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 MCOLN3Q8TDD5 553 aa9.53□□□□□ -0.88
CCDC40-212ENST00000574799 RNF34Q969K3 372 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms