RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ARHGAP17Q68EM7 881 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 NAPEPLDQ6IQ20 393 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 PTRH1Q86Y79 214 aaKnown RBP14.35□□□□□ -0.11
SMG6-215ENST00000574501 CNTN4Q8IWV2 1026 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 PIK3C3Q8NEB9 887 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 IPMKQ8NFU5 416 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 CALML6Q8TD86 181 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 TXNDC15Q96J42 360 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 CELF6Q96J87 481 aaKnown RBP14.35□□□□□ -0.11
SMG6-215ENST00000574501 ATXN3LQ9H3M9 355 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 NEK6Q9HC98 313 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 SNX10Q9Y5X0 201 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 SCN1AP35498 2009 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 ASPDHA6ND91 283 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 XPNPEP2O43895 674 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 TBC1D4O60343 1298 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 PEX10O60683 326 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 RFPL2O75678 378 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 MYL3P08590 195 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 LTA4HP09960 611 aaKnown RBP14.35□□□□□ -0.11
SMG6-215ENST00000574501 SPNP16150 400 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 IMPDH1P20839 514 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 ALDH7A1P49419 539 aaKnown RBP14.35□□□□□ -0.11
SMG6-215ENST00000574501 EMX1Q04741 257 aaPredicted RBP14.35□□□□□ -0.11
SMG6-215ENST00000574501 DGCR6Q14129 220 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 FAM209AQ5JX71 171 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 ZNF678Q5SXM1 525 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.35□□□□□ -0.114e-8■■■■□ 21.6
SMG6-215ENST00000574501 SMYD5Q6GMV2 418 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 BLOC1S3Q6QNY0 202 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 RIMKLAQ8IXN7 391 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 CLYBLQ8N0X4 340 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 OR13J1Q8NGT2 312 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 TWIST2Q8WVJ9 160 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 TSPAN18Q96SJ8 248 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 TRIM54Q9BYV2 358 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 RNF38Q9H0F5 515 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 ASB7Q9H672 318 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 ACAD9Q9H845 621 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 INTS7Q9NVH2 962 aaKnown RBP14.35□□□□□ -0.11
SMG6-215ENST00000574501 PGAP2Q9UHJ9 254 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 FBXO5Q9UKT4 447 aa14.35□□□□□ -0.11
SMG6-215ENST00000574501 I6L893 689 aaPredicted RBP14.34□□□□□ -0.11
SMG6-215ENST00000574501 SOAT2O75908 522 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 GABARAPO95166 117 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 SIX3O95343 332 aaPredicted RBP14.34□□□□□ -0.11
SMG6-215ENST00000574501 ENO2P09104 434 aaPredicted RBP14.34□□□□□ -0.11
SMG6-215ENST00000574501 MTHFRP42898 656 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 MAP2K4P45985 399 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 POU4F1Q01851 419 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 ADIGQ0VDE8 80 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 LAPTM5Q13571 262 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 UNC50Q53HI1 259 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 NOL9Q5SY16 702 aaKnown RBP14.34□□□□□ -0.11
SMG6-215ENST00000574501 GLYATQ6IB77 296 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 EFCAB12Q6NXP0 572 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 GALNT13Q8IUC8 556 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 POC5Q8NA72 575 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 FAR1Q8WVX9 515 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 MBOAT4Q96T53 435 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 CLSTN3Q9BQT9 956 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 MID1IP1Q9NPA3 183 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 SLC52A3Q9NQ40 469 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 ITM2CQ9NQX7 267 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 COL11A1P12107 1806 aaPredicted RBP14.34□□□□□ -0.11
SMG6-215ENST00000574501 COL11A2P13942 1736 aaPredicted RBP14.34□□□□□ -0.11
SMG6-215ENST00000574501 NRCAMQ92823 1304 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 TTC34A8MYJ7 566 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 SLC1A7O00341 560 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 SLC22A1O15245 554 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 TBX1O43435 398 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 CHRNA1P02708 482 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 CDH1P12830 882 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 ITIH1P19827 911 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 LMO2P25791 158 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 ICAM3P32942 547 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 SERPINB10P48595 397 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 NDUFV1P49821 464 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 TPI1P60174 286 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 AASDHQ4L235 1098 aaPredicted RBP14.34□□□□□ -0.11
SMG6-215ENST00000574501 TTC23Q5W5X9 447 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 PPP2R2DQ66LE6 453 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 PHYKPLQ8IUZ5 450 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 LYSMD2Q8IV50 215 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 ABI1Q8IZP0 508 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 ELMOD1Q8N336 334 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 C2CD4AQ8NCU7 369 aaPredicted RBP14.34□□□□□ -0.11
SMG6-215ENST00000574501 ZNF555Q8NEP9 628 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 SH3RF2Q8TEC5 729 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 SEPT1Q8WYJ6 367 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 ITCHQ96J02 903 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 UBXN10Q96LJ8 280 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 TEKT5Q96M29 485 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 BTBD2Q9BX70 525 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 SMOC2Q9H3U7 446 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 TUBB1Q9H4B7 451 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 TBC1D14Q9P2M4 693 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 AASSQ9UDR5 926 aa14.34□□□□□ -0.11
SMG6-215ENST00000574501 SYCE1LA8MT33 242 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 G3V2T6 193 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms