RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 SYT10Q6XYQ8 523 aa15.71■□□□□ 0.11
CHD3-215ENST00000572750 DBX2Q6ZNG2 339 aa15.71■□□□□ 0.11
CHD3-215ENST00000572750 CREG2Q8IUH2 290 aa15.71■□□□□ 0.11
CHD3-215ENST00000572750 SLC25A45Q8N413 288 aa15.71■□□□□ 0.11
CHD3-215ENST00000572750 EID2Q8N6I1 236 aa15.71■□□□□ 0.11
CHD3-215ENST00000572750 OR52K1Q8NGK4 314 aa15.71■□□□□ 0.11
CHD3-215ENST00000572750 BAHD1Q8TBE0 780 aaPredicted RBP15.71■□□□□ 0.11
CHD3-215ENST00000572750 PTCD2Q8WV60 388 aaKnown RBP15.71■□□□□ 0.11
CHD3-215ENST00000572750 FRMD8Q9BZ67 464 aaPredicted RBP15.71■□□□□ 0.11
CHD3-215ENST00000572750 SLC13A1Q9BZW2 595 aa15.71■□□□□ 0.11
CHD3-215ENST00000572750 SLC32A1Q9H598 525 aa15.71■□□□□ 0.11
CHD3-215ENST00000572750 NFKBIL1Q9UBC1 381 aaPredicted RBP15.71■□□□□ 0.11
CHD3-215ENST00000572750 MOSPD1Q9UJG1 213 aa15.71■□□□□ 0.11
CHD3-215ENST00000572750 KCTD3Q9Y597 815 aa15.71■□□□□ 0.11
CHD3-215ENST00000572750 SPAARA0A1B0GVQ0 90 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 PRSS38A1L453 326 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 ERI2A8K979 691 aaKnown RBP15.7■□□□□ 0.1
CHD3-215ENST00000572750 RASGRP1O95267 797 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 PYGLP06737 847 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 TPH1P17752 444 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 GRIA1P42261 906 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 POLD2P49005 469 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 HK3P52790 923 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 ETF1P62495 437 aaKnown RBP15.7■□□□□ 0.1
CHD3-215ENST00000572750 MSLNQ13421 630 aaPredicted RBP15.7■□□□□ 0.1
CHD3-215ENST00000572750 C1orf61Q13536 156 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 SEPT6Q14141 434 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 POU6F1Q14863 301 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 TAF1AQ15573 450 aaPredicted RBP15.7■□□□□ 0.1
CHD3-215ENST00000572750 C19orf48Q6RUI8 117 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 FAM151BQ6UXP7 276 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 PPP1R21Q6ZMI0 780 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 NLRP8Q86W28 1048 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 ATL2Q8NHH9 583 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 LMX1AQ8TE12 382 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 RHBDD1Q8TEB9 315 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 HIC2Q96JB3 615 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 C16orf45Q96MC5 204 aaPredicted RBP15.7■□□□□ 0.1
CHD3-215ENST00000572750 PLEKHG4BQ96PX9 1271 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 ZSCAN5AQ9BUG6 496 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 DDX47Q9H0S4 455 aaKnown RBP15.7■□□□□ 0.1
CHD3-215ENST00000572750 ARNT2Q9HBZ2 717 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 CYP4F12Q9HCS2 524 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 ARFGAP3Q9NP61 516 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 RAD18Q9NS91 495 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.7■□□□□ 0.1
CHD3-215ENST00000572750 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.7■□□□□ 0.1
CHD3-215ENST00000572750 IL17CQ9P0M4 197 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 FEZ2Q9UHY8 353 aaPredicted RBP15.7■□□□□ 0.1
CHD3-215ENST00000572750 TMEM98Q9Y2Y6 226 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 PKP3Q9Y446 797 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 GPSM3Q9Y4H4 160 aa15.7■□□□□ 0.1
CHD3-215ENST00000572750 OAS3Q9Y6K5 1087 aaKnown RBP15.7■□□□□ 0.1
CHD3-215ENST00000572750 TRIM38O00635 465 aa15.69■□□□□ 0.1
CHD3-215ENST00000572750 PSMD3O43242 534 aa15.69■□□□□ 0.1
CHD3-215ENST00000572750 AQP9O43315 295 aa15.69■□□□□ 0.1
CHD3-215ENST00000572750 SUN1O94901 812 aa15.69■□□□□ 0.1
CHD3-215ENST00000572750 SPAM1P38567 509 aa15.69■□□□□ 0.1
CHD3-215ENST00000572750 FNTAP49354 379 aa15.69■□□□□ 0.1
CHD3-215ENST00000572750 BLKP51451 505 aa15.69■□□□□ 0.1
CHD3-215ENST00000572750 ZNF140P52738 457 aaPredicted RBP15.69■□□□□ 0.1
CHD3-215ENST00000572750 GPS1Q13098 491 aa15.69■□□□□ 0.1
CHD3-215ENST00000572750 MARK2Q7KZI7 788 aaKnown RBP15.69■□□□□ 0.1
CHD3-215ENST00000572750 LINC00523Q86TU6 105 aa15.69■□□□□ 0.1
CHD3-215ENST00000572750 TRAM1L1Q8N609 369 aa15.69■□□□□ 0.1
CHD3-215ENST00000572750 DNAAF3Q8N9W5 541 aa15.69■□□□□ 0.1
CHD3-215ENST00000572750 OR4K2Q8NGD2 314 aa15.69■□□□□ 0.1
CHD3-215ENST00000572750 BRSK1Q8TDC3 778 aa15.69■□□□□ 0.1
CHD3-215ENST00000572750 BTN2A2Q8WVV5 523 aa15.69■□□□□ 0.1
CHD3-215ENST00000572750 COX14Q96I36 57 aa15.69■□□□□ 0.1
CHD3-215ENST00000572750 CLPBQ9H078 707 aa15.69■□□□□ 0.1
CHD3-215ENST00000572750 CDH19Q9H159 772 aa15.69■□□□□ 0.1
CHD3-215ENST00000572750 CARS2Q9HA77 564 aaKnown RBP15.69■□□□□ 0.1
CHD3-215ENST00000572750 IL26Q9NPH9 171 aa15.69■□□□□ 0.1
CHD3-215ENST00000572750 SPASTQ9UBP0 616 aa15.69■□□□□ 0.1
CHD3-215ENST00000572750 FTSJ1Q9UET6 329 aa15.69■□□□□ 0.1
CHD3-215ENST00000572750 CNOT6Q9ULM6 557 aaKnown RBP15.69■□□□□ 0.1
CHD3-215ENST00000572750 SLC17A4Q9Y2C5 497 aa15.69■□□□□ 0.1
CHD3-215ENST00000572750 ARID1BQ8NFD5 2236 aaPredicted RBP15.69■□□□□ 0.1
CHD3-215ENST00000572750 GLYATL1P3A0A0U1RQE8 302 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 CCDC78A2IDD5 438 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 C2orf81A6NN90 581 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 PDE2AO00408 941 aaPredicted RBP15.68■□□□□ 0.1
CHD3-215ENST00000572750 CCL22O00626 93 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 GAPDHSO14556 408 aaPredicted RBP15.68■□□□□ 0.1
CHD3-215ENST00000572750 STX7O15400 261 aaKnown RBP15.68■□□□□ 0.1
CHD3-215ENST00000572750 CRTAMO95727 393 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 KRT14P02533 472 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 FUCA1P04066 466 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 CEACAM5P06731 702 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 GIMD1P0DJR0 217 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 CEACAM1P13688 526 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 LPOP22079 712 aaPredicted RBP15.68■□□□□ 0.1
CHD3-215ENST00000572750 CASQ1P31415 396 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 GNPDA1P46926 289 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 SIM1P81133 766 aaPredicted RBP15.68■□□□□ 0.1
CHD3-215ENST00000572750 TMPRSS15P98073 1019 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 CDH17Q12864 832 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 DEFB133Q30KQ1 61 aa15.68■□□□□ 0.1
CHD3-215ENST00000572750 ATP13A5Q4VNC0 1218 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms