RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 PLXNA2O75051 1894 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 CCDC151A5D8V7 595 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 WNT9AO14904 365 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 UGT2B4P06133 528 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 GP1BAP07359 652 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 HLA-DPA1P20036 260 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 CA4P22748 312 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 ADPRHP54922 357 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 ARL4CP56559 192 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 RPL26P61254 145 aaKnown RBP13.73□□□□□ -0.21
RPAIN-209ENST00000571558 RAD51Q06609 339 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 CDH17Q12864 832 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 MTM1Q13496 603 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 ARMC12Q5T9G4 340 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 CDCP2Q5VXM1 449 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 KDM7AQ6ZMT4 941 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 MMAAQ8IVH4 418 aaKnown RBP13.73□□□□□ -0.21
RPAIN-209ENST00000571558 PDIK1LQ8N165 341 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 TMIEQ8NEW7 156 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 OR14C36Q8NHC7 312 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 PIH1D2Q8WWB5 315 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 OR8D1Q8WZ84 308 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 CCDC97Q96F63 343 aaPredicted RBP13.73□□□□□ -0.21
RPAIN-209ENST00000571558 IFT43Q96FT9 208 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 SIGLEC10Q96LC7 697 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 OSBPL1AQ9BXW6 950 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 TSPYL1Q9H0U9 437 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 POLR1BQ9H9Y6 1135 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 CPNE5Q9HCH3 593 aa13.73□□□□□ -0.21
RPAIN-209ENST00000571558 PIH1D1Q9NWS0 290 aaKnown RBP13.73□□□□□ -0.21
RPAIN-209ENST00000571558 MTRF1LQ9UGC7 380 aaKnown RBP13.73□□□□□ -0.21
RPAIN-209ENST00000571558 RPL26L1Q9UNX3 145 aaKnown RBP13.73□□□□□ -0.21
RPAIN-209ENST00000571558 TBC1D3DA0A087WVF3 549 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 TBC1D3IA0A087WXS9 549 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 TBC1D3EA0A087X179 549 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 TBC1D3KA0A087X1G2 549 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 TBC1D3FA6NER0 549 aaPredicted RBP13.72□□□□□ -0.21
RPAIN-209ENST00000571558 TBC1D3LB9A6J9 549 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 AP3B1O00203 1094 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 EIF3HO15372 352 aaKnown RBP eCLIP13.72□□□□□ -0.21
RPAIN-209ENST00000571558 SLC7A4O43246 635 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 RNGTTO60942 597 aaKnown RBP13.72□□□□□ -0.21
RPAIN-209ENST00000571558 BANF1O75531 89 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 FGF1P05230 155 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 TBC1D3HP0C7X1 549 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 H2AFXP16104 143 aaPredicted RBP13.72□□□□□ -0.21
RPAIN-209ENST00000571558 CSRP3P50461 194 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 METAP1P53582 386 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 DHX9Q08211 1270 aaKnown RBP13.72□□□□□ -0.21
RPAIN-209ENST00000571558 GALNT3Q14435 633 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 STAT4Q14765 748 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 FASTKD3Q14CZ7 662 aaKnown RBP13.72□□□□□ -0.21
RPAIN-209ENST00000571558 BRD3Q15059 726 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 QPCTQ16769 361 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 CERCAMQ5T4B2 595 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 TBC1D3GQ6DHY5 549 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 TBC1D3CQ6IPX1 549 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 EMBQ6PCB8 327 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 XKR5Q6UX68 686 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 TMC3Q7Z5M5 1100 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 SPATS2Q86XZ4 545 aaKnown RBP13.72□□□□□ -0.21
RPAIN-209ENST00000571558 IGDCC3Q8IVU1 814 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 TBC1D3Q8IZP1 549 aaPredicted RBP13.72□□□□□ -0.21
RPAIN-209ENST00000571558 MPP5Q8N3R9 675 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 SLC25A41Q8N5S1 370 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 HCAR2Q8TDS4 363 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 CAVIN3Q969G5 261 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 FAM131CQ96AQ9 280 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 ADGRE3Q9BY15 652 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 SEMA4CQ9C0C4 833 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 EVA1BQ9NVM1 165 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 DKK3Q9UBP4 350 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 PPIL1Q9Y3C6 166 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 TEX264Q9Y6I9 313 aa13.72□□□□□ -0.21
RPAIN-209ENST00000571558 UBR5O95071 2799 aaPredicted RBP13.71□□□□□ -0.21
RPAIN-209ENST00000571558 PIEZO2Q9H5I5 2752 aa13.71□□□□□ -0.21
RPAIN-209ENST00000571558 A0A1W2PQ67 120 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 ANKRD66B4E2M5 251 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 KLK10O43240 276 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 SIGLEC6O43699 453 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 LZTS3O60299 673 aaPredicted RBP13.71□□□□□ -0.22
RPAIN-209ENST00000571558 OPA1O60313 960 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 CPP00450 1065 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 PRNPP04156 253 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 CKMT1AP12532 417 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 TPH1P17752 444 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 MGAT1P26572 445 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 NPY2RP49146 381 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 GABREP78334 506 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 CRADDP78560 199 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 DAB2P98082 770 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 LY6DQ14210 128 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 BBS9Q3SYG4 887 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 ZNF805Q5CZA5 627 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 CENPUQ71F23 418 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 AADATQ8N5Z0 425 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 DNAAF3Q8N9W5 541 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 LPCAT1Q8NF37 534 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 OR4C6Q8NH72 309 aa13.71□□□□□ -0.22
RPAIN-209ENST00000571558 PDCD6IPQ8WUM4 868 aaKnown RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms