RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	TRAP1	Q12931	704 aa	Known RBP	11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	CNKSR3	Q6P9H4	555 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	UBE2Q1	Q7Z7E8	422 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	MMAA	Q8IVH4	418 aa	Known RBP	11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	MFSD2A	Q8NA29	543 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	SUN5	Q8TC36	379 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	DUS3L	Q96G46	650 aa	Known RBP	11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	ATXN7L3B	Q96GX2	97 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	ADI1	Q9BV57	179 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	CWH43	Q9H720	699 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	RIC8B	Q9NVN3	520 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	SEPT3	Q9UH03	358 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	DAPK2	Q9UIK4	370 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	TLR6	Q9Y2C9	796 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	SAC3D1	A6NKF1	404 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	ADAM12	O43184	909 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	PIGN	O95427	931 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	HAPLN1	P10915	354 aa	Predicted RBP	11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	BMP2	P12643	396 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	MLN	P12872	115 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	TFEB	P19484	476 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	YWHAQ	P27348	245 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	HTR7	P34969	479 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	RALGDS	Q12967	914 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	GRTP1	Q5TC63	336 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	CAMK1D	Q8IU85	385 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	ZC3H7A	Q8IWR0	971 aa	Known RBP	11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	CBR4	Q8N4T8	237 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	PACRGL	Q8N7B6	248 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	ATP6V0D2	Q8N8Y2	350 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	LILRB4	Q8NHJ6	448 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	CELF6	Q96J87	481 aa	Known RBP	11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	EGLN2	Q96KS0	407 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	FCRL2	Q96LA5	508 aa	Predicted RBP	11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	SEPT5	Q99719	369 aa	Predicted RBP	11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	CPNE1	Q99829	537 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	NMRAL1	Q9HBL8	299 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	ACSS2	Q9NR19	701 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	PIH1D1	Q9NWS0	290 aa	Known RBP	11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	OXSM	Q9NWU1	459 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	VTI1B	Q9UEU0	232 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	ATP11B	Q9Y2G3	1177 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	HS3ST4	Q9Y661	456 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	PTPRS	Q13332	1948 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820	KIAA1671	Q9BY89	1806 aa		11.95	□□□□□ -0.5
SPG7-222	ENST00000569820		A0A096LPK6	155 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	CENPBD1	B2RD01	187 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	SLCO1B7	G3V0H7	640 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	BCL10	O95999	233 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	MOCS2	O96007	188 aa	Predicted RBP	11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	ENO2	P09104	434 aa	Predicted RBP	11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	ERVK-10	P10266	1014 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	MGAT1	P26572	445 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	S100A5	P33763	92 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	MAGEA12	P43365	314 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	NRG1	Q02297	640 aa	Predicted RBP	11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	SMARCB1	Q12824	385 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	MERTK	Q12866	999 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	PRKAA1	Q13131	559 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	NEDD8	Q15843	81 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	ARL13A	Q5H913	290 aa	Predicted RBP	11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	GK5	Q6ZS86	529 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	KCTD8	Q6ZWB6	473 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	FRA10AC1	Q70Z53	315 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	IGFN1	Q86VF2	1251 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	ARHGAP12	Q8IWW6	846 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	C2orf15	Q8WU43	125 aa	Known RBP	11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	FBXO32	Q969P5	355 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	ERLEC1	Q96DZ1	483 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	MOCOS	Q96EN8	888 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	KLHL8	Q9P2G9	620 aa	Predicted RBP	11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	MTRR	Q9UBK8	725 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	MID2	Q9UJV3	735 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	RBMX2	Q9Y388	322 aa	Known RBP	11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	PRORSD1P	A6NEY8	169 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	ZNF839	A8K0R7	811 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	TRIM24	O15164	1050 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	FGF10	O15520	208 aa	Predicted RBP	11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	HSPA1A	P0DMV8	641 aa	Known RBP	11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	HSPA1B	P0DMV9	641 aa	Known RBP	11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	ATF6	P18850	670 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	RCVRN	P35243	200 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	ETFB	P38117	255 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	CCR10	P46092	362 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	GRIA4	P48058	902 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	ALDH7A1	P49419	539 aa	Known RBP	11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	IRF9	Q00978	393 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	TAF10	Q12962	218 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	DUSP4	Q13115	394 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	SF3B4	Q15427	424 aa	Known RBP eCLIP	11.94	□□□□□ -0.5	8e-7	■■■■■ 44.9
SPG7-222	ENST00000569820	PIK3R6	Q5UE93	754 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	SLC8B1	Q6J4K2	584 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	LRRC8E	Q6NSJ5	796 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	FAM117B	Q6P1L5	589 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	ERMP1	Q7Z2K6	904 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	PID1	Q7Z2X4	250 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	FBXO22	Q8NEZ5	403 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	STON2	Q8WXE9	905 aa		11.94	□□□□□ -0.5
SPG7-222	ENST00000569820	ISL2	Q96A47	359 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms