RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 IGDCC3Q8IVU1 814 aa23.3■■□□□ 1.32
RAB40C-212ENST00000569575 CDKL2Q92772 493 aa23.3■■□□□ 1.32
RAB40C-212ENST00000569575 KLK6Q92876 244 aa23.3■■□□□ 1.32
RAB40C-212ENST00000569575 GLYATL1Q969I3 302 aa23.3■■□□□ 1.32
RAB40C-212ENST00000569575 HIC2Q96JB3 615 aa23.3■■□□□ 1.32
RAB40C-212ENST00000569575 FCRL3Q96P31 734 aaPredicted RBP23.3■■□□□ 1.32
RAB40C-212ENST00000569575 FUT8Q9BYC5 575 aa23.3■■□□□ 1.32
RAB40C-212ENST00000569575 ZCCHC2Q9C0B9 1178 aaKnown RBP23.3■■□□□ 1.32
RAB40C-212ENST00000569575 WDR26Q9H7D7 661 aa23.3■■□□□ 1.32
RAB40C-212ENST00000569575 SLC2A6Q9UGQ3 507 aa23.3■■□□□ 1.32
RAB40C-212ENST00000569575 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.3■■□□□ 1.32
RAB40C-212ENST00000569575 PILRBQ9UKJ0 227 aa23.3■■□□□ 1.32
RAB40C-212ENST00000569575 V9GYY5 206 aaPredicted RBP23.3■■□□□ 1.32
RAB40C-212ENST00000569575 DOCK9Q9BZ29 2069 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 GAPDHSO14556 408 aaPredicted RBP23.29■■□□□ 1.32
RAB40C-212ENST00000569575 RAD51BO15315 384 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 ERLIN1O75477 346 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 GOT2P00505 430 aaKnown RBP23.29■■□□□ 1.32
RAB40C-212ENST00000569575 MYCLP1P12525 358 aaPredicted RBP23.29■■□□□ 1.32
RAB40C-212ENST00000569575 STX2P32856 288 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 IGFALSP35858 605 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 PTGER3P43115 390 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 ARSDP51689 593 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 KIAA1024LP59773 190 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 TMPRSS15P98073 1019 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 SRSF5Q13243 272 aaKnown RBP23.29■■□□□ 1.32
RAB40C-212ENST00000569575 ITIH4Q14624 930 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 PTPRCAPQ14761 206 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 FASTKD3Q14CZ7 662 aaKnown RBP23.29■■□□□ 1.32
RAB40C-212ENST00000569575 BRD3Q15059 726 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 RNF187Q5TA31 235 aaPredicted RBP23.29■■□□□ 1.32
RAB40C-212ENST00000569575 LAIR1Q6GTX8 287 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 NEPROQ6NW34 567 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 KIAA0408Q6ZU52 694 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 GALNT7Q86SF2 657 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 PHYKPLQ8IUZ5 450 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 CERS2Q96G23 380 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 KLHDC7BQ96G42 594 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 BMFQ96LC9 184 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 WDR83Q9BRX9 315 aaKnown RBP23.29■■□□□ 1.32
RAB40C-212ENST00000569575 APOOQ9BUR5 198 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 LRRC4CQ9HCJ2 640 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 MBNL1Q9NR56 388 aaKnown RBP23.29■■□□□ 1.32
RAB40C-212ENST00000569575 CATSPERZQ9NTU4 200 aa23.29■■□□□ 1.32
RAB40C-212ENST00000569575 C20orf96Q9NUD7 363 aaPredicted RBP23.29■■□□□ 1.32
RAB40C-212ENST00000569575 TNFRSF10CO14798 259 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 VILLO15195 856 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 CD3EAPO15446 510 aaKnown RBP23.28■■□□□ 1.32
RAB40C-212ENST00000569575 VEGFDO43915 354 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 BANF1O75531 89 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 SOD1P00441 154 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 PCCBP05166 539 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 RALBP11234 206 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 FOXN2P32314 431 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 ATP13A5Q4VNC0 1218 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 ZRANB3Q5FWF4 1079 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 ALS2CLQ60I27 953 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 GCNT7Q6ZNI0 430 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 PRR23BQ6ZRT6 265 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 RFLNAQ6ZTI6 216 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 KCNMB4Q86W47 210 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 CNTN4Q8IWV2 1026 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 DDHD1Q8NEL9 900 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 PRSS33Q8NF86 280 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 CAVIN3Q969G5 261 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 CFAP36Q96G28 342 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 COX14Q96I36 57 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 TXLNGYQ9BZA5 131 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 RMI1Q9H9A7 625 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 TRIM39Q9HCM9 518 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 TM9SF3Q9HD45 589 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 AASDHPPTQ9NRN7 309 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 GPR27Q9NS67 375 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 VPS18Q9P253 973 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 CRLS1Q9UJA2 301 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 CACNA1HO95180 2353 aa23.28■■□□□ 1.32
RAB40C-212ENST00000569575 CCDC151A5D8V7 595 aa23.27■■□□□ 1.32
RAB40C-212ENST00000569575 CFAP99D6REC4 459 aa23.27■■□□□ 1.32
RAB40C-212ENST00000569575 QSOX1O00391 747 aa23.27■■□□□ 1.32
RAB40C-212ENST00000569575 SLC25A14O95258 325 aaPredicted RBP23.27■■□□□ 1.32
RAB40C-212ENST00000569575 ABHD2P08910 425 aa23.27■■□□□ 1.32
RAB40C-212ENST00000569575 ARNTP27540 789 aa23.27■■□□□ 1.32
RAB40C-212ENST00000569575 THOP1P52888 689 aa23.27■■□□□ 1.32
RAB40C-212ENST00000569575 PMS2P54278 862 aa23.27■■□□□ 1.32
RAB40C-212ENST00000569575 CDK3Q00526 305 aa23.27■■□□□ 1.32
RAB40C-212ENST00000569575 MGAT5Q09328 741 aa23.27■■□□□ 1.32
RAB40C-212ENST00000569575 NAB1Q13506 487 aa23.27■■□□□ 1.32
RAB40C-212ENST00000569575 NXPE1Q8N323 547 aa23.27■■□□□ 1.32
RAB40C-212ENST00000569575 DEFB119Q8N690 84 aa23.27■■□□□ 1.32
RAB40C-212ENST00000569575 AENQ8WTP8 325 aaKnown RBP23.27■■□□□ 1.32
RAB40C-212ENST00000569575 ZNF514Q96K75 400 aaPredicted RBP23.27■■□□□ 1.32
RAB40C-212ENST00000569575 C9orf72Q96LT7 481 aa23.27■■□□□ 1.32
RAB40C-212ENST00000569575 CDC42EP4Q9H3Q1 356 aaKnown RBP23.27■■□□□ 1.32
RAB40C-212ENST00000569575 SUDS3Q9H7L9 328 aaPredicted RBP23.27■■□□□ 1.32
RAB40C-212ENST00000569575 HCN4Q9Y3Q4 1203 aa23.27■■□□□ 1.32
RAB40C-212ENST00000569575 TNRC6BQ9UPQ9 1833 aaKnown RBP23.26■■□□□ 1.31
RAB40C-212ENST00000569575 FADS2P1A8MWK0 482 aa23.26■■□□□ 1.31
RAB40C-212ENST00000569575 EPN2O95208 641 aa23.26■■□□□ 1.31
RAB40C-212ENST00000569575 ITPKAP23677 461 aa23.26■■□□□ 1.31
RAB40C-212ENST00000569575 NBL1P41271 181 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms