RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 CHD8Q9HCK8 2581 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 UBA6A0AVT1 1052 aaPredicted RBP7.6□□□□□ -1.19
CDH13-214ENST00000569455 TCP11X1B4DZS4 312 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 SPECC1L-ADORA2AF8WAN1 911 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 H0Y858 1186 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 PSMD11O00231 422 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 NDUFAB1O14561 156 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 BIRC5O15392 142 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 PHGDHO43175 533 aaKnown RBP7.6□□□□□ -1.19
CDH13-214ENST00000569455 SYNCRIPO60506 623 aaKnown RBP7.6□□□□□ -1.19
CDH13-214ENST00000569455 PRAMEF1O95521 474 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 FAM107AO95990 144 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 IL1BP01584 269 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 PYGLP06737 847 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 CTSLP07711 333 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 VIMP08670 466 aaKnown RBP7.6□□□□□ -1.19
CDH13-214ENST00000569455 F7P08709 466 aaPredicted RBP7.6□□□□□ -1.19
CDH13-214ENST00000569455 DHRS4L1P0CG22 281 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 CHRM1P11229 460 aaPredicted RBP7.6□□□□□ -1.19
CDH13-214ENST00000569455 TIMP2P16035 220 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 ZNF7P17097 686 aaPredicted RBP7.6□□□□□ -1.19
CDH13-214ENST00000569455 BPIP17213 487 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 CTHP32929 405 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 SLC26A3P40879 764 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 NBL1P41271 181 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 PTGER3P43115 390 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 ETV4P43268 484 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 SOX9P48436 509 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 SERPINB4P48594 390 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 XIAPP98170 497 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 CCDC15Q0P6D6 951 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 MESP2Q0VG99 397 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 PEX6Q13608 980 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 SEMA3AQ14563 771 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 PTPRRQ15256 657 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 ZKSCAN8Q15776 578 aaPredicted RBP7.6□□□□□ -1.19
CDH13-214ENST00000569455 SLC44A4Q53GD3 710 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 PPM1JQ5JR12 505 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 RBM20Q5T481 1227 aaKnown RBP7.6□□□□□ -1.19
CDH13-214ENST00000569455 N4BP2L1Q5TBK1 243 aaPredicted RBP7.6□□□□□ -1.19
CDH13-214ENST00000569455 EGFLAMQ63HQ2 1017 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 ATG16L1Q676U5 607 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 KLC3Q6P597 504 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 FBXL19Q6PCT2 694 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 FAM151BQ6UXP7 276 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 ZNF852Q6ZMS4 543 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 RGS9BPQ6ZS82 235 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 TRMT11Q7Z4G4 463 aaKnown RBP7.6□□□□□ -1.19
CDH13-214ENST00000569455 CLEC14AQ86T13 490 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 LDB1Q86U70 411 aaPredicted RBP7.6□□□□□ -1.19
CDH13-214ENST00000569455 TSPAN33Q86UF1 283 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 CHPFQ8IZ52 775 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 RBFAQ8N0V3 343 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 SYNPOQ8N3V7 929 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 ZNF513Q8N8E2 541 aaPredicted RBP7.6□□□□□ -1.19
CDH13-214ENST00000569455 ARMC2Q8NEN0 867 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 RAB3IL1Q8TBN0 382 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 RDH11Q8TC12 318 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 ZNF398Q8TD17 642 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 DTX3LQ8TDB6 740 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 BCAS4Q8TDM0 211 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 LPGAT1Q92604 370 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 ULK4Q96C45 1275 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 CHFRQ96EP1 664 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 NDNQ99608 321 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 OMDQ99983 421 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 ASB8Q9H765 288 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 FBRSQ9HAH7 460 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 SYTL2Q9HCH5 934 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 GPAMQ9HCL2 828 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 PCDH12Q9NPG4 1184 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 PRSS16Q9NQE7 514 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 ARHGEF3Q9NR81 526 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.6□□□□□ -1.19
CDH13-214ENST00000569455 NFKBIL1Q9UBC1 381 aaPredicted RBP7.6□□□□□ -1.19
CDH13-214ENST00000569455 CRLS1Q9UJA2 301 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 FBXL21Q9UKT6 434 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 CRYL1Q9Y2S2 319 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 PCDHB1Q9Y5F3 818 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 STON1Q9Y6Q2 735 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 COL4A2P08572 1712 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 TPRP12270 2363 aaKnown RBP7.6□□□□□ -1.19
CDH13-214ENST00000569455 PLXNA2O75051 1894 aa7.6□□□□□ -1.19
CDH13-214ENST00000569455 PLXNB3Q9ULL4 1909 aa7.59□□□□□ -1.19
CDH13-214ENST00000569455 WDR91A4D1P6 747 aa7.59□□□□□ -1.19
CDH13-214ENST00000569455 A8MX80 341 aa7.59□□□□□ -1.19
CDH13-214ENST00000569455 F8W8V4 182 aa7.59□□□□□ -1.19
CDH13-214ENST00000569455 H3BMM5 538 aa7.59□□□□□ -1.19
CDH13-214ENST00000569455 PRMT5O14744 637 aaPredicted RBP7.59□□□□□ -1.19
CDH13-214ENST00000569455 PLIN3O60664 434 aa7.59□□□□□ -1.19
CDH13-214ENST00000569455 VPS26AO75436 327 aa7.59□□□□□ -1.19
CDH13-214ENST00000569455 RHOBTB1O94844 696 aa7.59□□□□□ -1.19
CDH13-214ENST00000569455 KLHL2O95198 593 aa7.59□□□□□ -1.19
CDH13-214ENST00000569455 ADH1BP00325 375 aa7.59□□□□□ -1.19
CDH13-214ENST00000569455 ESR1P03372 595 aa7.59□□□□□ -1.19
CDH13-214ENST00000569455 PROCP04070 461 aa7.59□□□□□ -1.19
CDH13-214ENST00000569455 C1SP09871 688 aa7.59□□□□□ -1.19
CDH13-214ENST00000569455 ELFN1P0C7U0 828 aa7.59□□□□□ -1.19
CDH13-214ENST00000569455 SLC35E2BP0CK96 405 aa7.59□□□□□ -1.19
CDH13-214ENST00000569455 PKMP14618 531 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms