RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 DDTLA6NHG4 134 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 GTPBP1O00178 669 aaKnown RBP3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 HSPB6O14558 160 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 DHX16O60231 1041 aaKnown RBP3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 TMEM63AO94886 807 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 METTL18O95568 372 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 MLYCDO95822 493 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 CNPP09543 421 aaKnown RBP3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 ZNF853P0CG23 659 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 ALOX12P18054 663 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 TKTP29401 623 aaKnown RBP3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 CCND3P30281 292 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 HOXD13P35453 343 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 UBA7P41226 1012 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 CCR9P51686 369 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 GALNT2Q10471 571 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 GPS2Q13227 327 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 GPR18Q14330 331 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 IL13RA2Q14627 380 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 SHHQ15465 462 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 CCL14Q16627 93 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 LRIT3Q3SXY7 679 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 FBXO43Q4G163 708 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 CBWD5Q5RIA9 395 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 C9orf50Q5SZB4 431 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 UBAP2Q5T6F2 1119 aaKnown RBP3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 DCAF12L2Q5VW00 463 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 NAPEPLDQ6IQ20 393 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 APOBEC3HQ6NTF7 200 aaKnown RBP3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 AADACL2Q6P093 401 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 TMTC3Q6ZXV5 915 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 TRILQ7L0X0 811 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 BHLHA9Q7RTU4 235 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 PRR26Q8N8Z3 221 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 USP38Q8NB14 1042 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 SETD9Q8NE22 299 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 CEP76Q8TAP6 659 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 KCNG4Q8TDN1 519 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 TEKT1Q969V4 418 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 RNF125Q96EQ8 232 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 RNFT2Q96EX2 444 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 RADILQ96JH8 1075 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 APOLD1Q96LR9 279 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 SLF1Q9BQI6 1058 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 IFT27Q9BW83 186 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 HIPK2Q9H2X6 1198 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 TTYH1Q9H313 450 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 CXorf56Q9H5V9 222 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 NCKIPSDQ9NZQ3 722 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 ADD3Q9UEY8 706 aaKnown RBP3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 CD207Q9UJ71 328 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 TBX20Q9UMR3 447 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 PCDHA7Q9UN72 937 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 RAI2Q9Y5P3 530 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 PTGDR2Q9Y5Y4 395 aa3.49□□□□□ -1.85
HMGB1P6-201ENST00000569046 TMEM247A6NEH6 219 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 SPRY3O43610 288 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 GJB3O75712 270 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 CLDN7O95471 211 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 CYP1A2P05177 515 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 NGFRP08138 427 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 HOXB7P09629 217 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 CPA1P15085 419 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 PORP16435 677 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 CHMP24386 653 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 GJC1P36383 396 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 AVPR1AP37288 418 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 THPOP40225 353 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 MMP14P50281 582 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 FKBP1AP62942 108 aaKnown RBP3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 ABATP80404 500 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 CUL4AQ13619 759 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 BECN1Q14457 450 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 HNF4GQ14541 408 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 WDR43Q15061 677 aaKnown RBP eCLIP3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 RPE65Q16518 533 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 CDC37Q16543 378 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 CCDC57Q2TAC2 916 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 ZNF284Q2VY69 593 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 TMEM268Q5VZI3 342 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 RUSC1-AS1Q66K80 236 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 CDC42EP5Q6NZY7 148 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 C15orf52Q6ZUT6 534 aaKnown RBP3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 H1FNTQ75WM6 255 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 ZNF367Q7RTV3 350 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 R3HCC1LQ7Z5L2 792 aaKnown RBP3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 SNX32Q86XE0 403 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 CAMK1DQ8IU85 385 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 CADM3Q8N126 398 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 TMEM57Q8N5G2 664 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 BICD2Q8TD16 824 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 TRIB2Q92519 343 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 ATP6V1E2Q96A05 226 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 NSUN4Q96CB9 384 aaKnown RBP3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 PPP1R10Q96QC0 940 aaKnown RBP3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 TEFMQ96QE5 360 aaKnown RBP3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 PARK7Q99497 189 aaKnown RBP3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 ZPBPQ9BS86 351 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 USP44Q9H0E7 712 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms