RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 IPMKQ8NFU5 416 aa17.4■□□□□ 0.38
EDC3-215ENST00000569007 ZDHHC1Q8WTX9 485 aa17.4■□□□□ 0.38
EDC3-215ENST00000569007 MRGPRX2Q96LB1 330 aa17.4■□□□□ 0.38
EDC3-215ENST00000569007 SRPK1Q96SB4 655 aaKnown RBP17.4■□□□□ 0.38
EDC3-215ENST00000569007 SPATA16Q9BXB7 569 aa17.4■□□□□ 0.38
EDC3-215ENST00000569007 RNF215Q9Y6U7 377 aa17.4■□□□□ 0.38
EDC3-215ENST00000569007 COL27A1Q8IZC6 1860 aaPredicted RBP17.39■□□□□ 0.38
EDC3-215ENST00000569007 MIF4GDA9UHW6 222 aaKnown RBP17.39■□□□□ 0.37
EDC3-215ENST00000569007 NTN3O00634 580 aaPredicted RBP17.39■□□□□ 0.37
EDC3-215ENST00000569007 AURKAO14965 403 aa17.39■□□□□ 0.37
EDC3-215ENST00000569007 DDX3YO15523 660 aaKnown RBP17.39■□□□□ 0.37
EDC3-215ENST00000569007 MPOP05164 745 aa17.39■□□□□ 0.37
EDC3-215ENST00000569007 RPLP0P05388 317 aaKnown RBP17.39■□□□□ 0.37
EDC3-215ENST00000569007 RBP3P10745 1247 aa17.39■□□□□ 0.37
EDC3-215ENST00000569007 ACTR1BP42025 376 aa17.39■□□□□ 0.37
EDC3-215ENST00000569007 TNNT3P45378 269 aaPredicted RBP17.39■□□□□ 0.37
EDC3-215ENST00000569007 MAZP56270 477 aaKnown RBP17.39■□□□□ 0.37
EDC3-215ENST00000569007 DCDC1P59894 354 aa17.39■□□□□ 0.37
EDC3-215ENST00000569007 ACTR1AP61163 376 aa17.39■□□□□ 0.37
EDC3-215ENST00000569007 CCL7P80098 99 aa17.39■□□□□ 0.37
EDC3-215ENST00000569007 DARS2Q6PI48 645 aaKnown RBP17.39■□□□□ 0.37
EDC3-215ENST00000569007 ATXN7L3BQ96GX2 97 aa17.39■□□□□ 0.37
EDC3-215ENST00000569007 FERMT1Q9BQL6 677 aa17.39■□□□□ 0.37
EDC3-215ENST00000569007 GBA3Q9H227 469 aa17.39■□□□□ 0.37
EDC3-215ENST00000569007 RAD18Q9NS91 495 aa17.39■□□□□ 0.37
EDC3-215ENST00000569007 VPS18Q9P253 973 aa17.39■□□□□ 0.37
EDC3-215ENST00000569007 LRIT1Q9P2V4 623 aa17.39■□□□□ 0.37
EDC3-215ENST00000569007 NFKBIL1Q9UBC1 381 aaPredicted RBP17.39■□□□□ 0.37
EDC3-215ENST00000569007 ZNHIT2Q9UHR6 403 aa17.39■□□□□ 0.37
EDC3-215ENST00000569007 APPL1Q9UKG1 709 aa17.39■□□□□ 0.37
EDC3-215ENST00000569007 PRKAB1Q9Y478 270 aa17.39■□□□□ 0.37
EDC3-215ENST00000569007 PCYT1BQ9Y5K3 369 aaPredicted RBP17.39■□□□□ 0.37
EDC3-215ENST00000569007 ENTPD2Q9Y5L3 495 aa17.39■□□□□ 0.37
EDC3-215ENST00000569007 ADGRG1Q9Y653 693 aa17.39■□□□□ 0.37
EDC3-215ENST00000569007 CAPN6Q9Y6Q1 641 aa17.39■□□□□ 0.37
EDC3-215ENST00000569007 FAM208BQ5VWN6 2430 aa17.39■□□□□ 0.37
EDC3-215ENST00000569007 A0A1W2PQM1 296 aa17.38■□□□□ 0.37
EDC3-215ENST00000569007 KCNN4O15554 427 aa17.38■□□□□ 0.37
EDC3-215ENST00000569007 DNAJC6O75061 913 aa17.38■□□□□ 0.37
EDC3-215ENST00000569007 PTMAP06454 111 aaKnown RBP17.38■□□□□ 0.37
EDC3-215ENST00000569007 BPIP17213 487 aa17.38■□□□□ 0.37
EDC3-215ENST00000569007 GABREP78334 506 aa17.38■□□□□ 0.37
EDC3-215ENST00000569007 MPP3Q13368 585 aa17.38■□□□□ 0.37
EDC3-215ENST00000569007 ZNF569Q5MCW4 686 aa17.38■□□□□ 0.37
EDC3-215ENST00000569007 ITPRIPL1Q6GPH6 555 aa17.38■□□□□ 0.37
EDC3-215ENST00000569007 C17orf82Q86X59 251 aaPredicted RBP17.38■□□□□ 0.37
EDC3-215ENST00000569007 CCNJLQ8IV13 435 aa17.38■□□□□ 0.37
EDC3-215ENST00000569007 PATE1Q8WXA2 126 aa17.38■□□□□ 0.37
EDC3-215ENST00000569007 GFM1Q96RP9 751 aaKnown RBP17.38■□□□□ 0.37
EDC3-215ENST00000569007 ZSCAN5AQ9BUG6 496 aa17.38■□□□□ 0.37
EDC3-215ENST00000569007 LRRN3Q9H3W5 708 aa17.38■□□□□ 0.37
EDC3-215ENST00000569007 ARFGAP3Q9NP61 516 aa17.38■□□□□ 0.37
EDC3-215ENST00000569007 A0A1W2PNU3 283 aaPredicted RBP17.37■□□□□ 0.37
EDC3-215ENST00000569007 TLX3O43711 291 aaPredicted RBP17.37■□□□□ 0.37
EDC3-215ENST00000569007 NUDT21O43809 227 aaKnown RBP17.37■□□□□ 0.37
EDC3-215ENST00000569007 ANXA9O76027 345 aa17.37■□□□□ 0.37
EDC3-215ENST00000569007 STK10O94804 968 aaKnown RBP17.37■□□□□ 0.37
EDC3-215ENST00000569007 ECEL1O95672 775 aa17.37■□□□□ 0.37
EDC3-215ENST00000569007 PNLIPP16233 465 aa17.37■□□□□ 0.37
EDC3-215ENST00000569007 HLA-DPA1P20036 260 aa17.37■□□□□ 0.37
EDC3-215ENST00000569007 LSSP48449 732 aa17.37■□□□□ 0.37
EDC3-215ENST00000569007 PDX1P52945 283 aa17.37■□□□□ 0.37
EDC3-215ENST00000569007 LRP8Q14114 963 aa17.37■□□□□ 0.37
EDC3-215ENST00000569007 SLC1A5Q15758 541 aa17.37■□□□□ 0.37
EDC3-215ENST00000569007 ZNF648Q5T619 568 aaPredicted RBP17.37■□□□□ 0.37
EDC3-215ENST00000569007 SPRED1Q7Z699 444 aa17.37■□□□□ 0.37
EDC3-215ENST00000569007 ARL14Q8N4G2 192 aa17.37■□□□□ 0.37
EDC3-215ENST00000569007 TTC30BQ8N4P2 665 aa17.37■□□□□ 0.37
EDC3-215ENST00000569007 RNF10Q8N5U6 811 aaKnown RBP17.37■□□□□ 0.37
EDC3-215ENST00000569007 TRAM1L1Q8N609 369 aa17.37■□□□□ 0.37
EDC3-215ENST00000569007 GRAMD1AQ96CP6 724 aa17.37■□□□□ 0.37
EDC3-215ENST00000569007 HES6Q96HZ4 224 aa17.37■□□□□ 0.37
EDC3-215ENST00000569007 GORASP1Q9BQQ3 440 aa17.37■□□□□ 0.37
EDC3-215ENST00000569007 FSD1LQ9BXM9 530 aa17.37■□□□□ 0.37
EDC3-215ENST00000569007 TRABDQ9H4I3 376 aa17.37■□□□□ 0.37
EDC3-215ENST00000569007 POLR1BQ9H9Y6 1135 aa17.37■□□□□ 0.37
EDC3-215ENST00000569007 BPIFA1Q9NP55 256 aa17.37■□□□□ 0.37
EDC3-215ENST00000569007 D6RAR5 112 aa17.36■□□□□ 0.37
EDC3-215ENST00000569007 SLC25A14O95258 325 aaPredicted RBP17.36■□□□□ 0.37
EDC3-215ENST00000569007 AGTP01019 485 aa17.36■□□□□ 0.37
EDC3-215ENST00000569007 PSMB4P28070 264 aa17.36■□□□□ 0.37
EDC3-215ENST00000569007 HMGCLP35914 325 aa17.36■□□□□ 0.37
EDC3-215ENST00000569007 GEMP55040 296 aa17.36■□□□□ 0.37
EDC3-215ENST00000569007 PEX6Q13608 980 aa17.36■□□□□ 0.37
EDC3-215ENST00000569007 TBC1D25Q3MII6 688 aa17.36■□□□□ 0.37
EDC3-215ENST00000569007 C3orf38Q5JPI3 329 aa17.36■□□□□ 0.37
EDC3-215ENST00000569007 ANKRD20A2Q5SQ80 823 aa17.36■□□□□ 0.37
EDC3-215ENST00000569007 ANKRD20A1Q5TYW2 823 aa17.36■□□□□ 0.37
EDC3-215ENST00000569007 ANKRD20A3Q5VUR7 823 aa17.36■□□□□ 0.37
EDC3-215ENST00000569007 PDPK2PQ6A1A2 396 aa17.36■□□□□ 0.37
EDC3-215ENST00000569007 C19orf48Q6RUI8 117 aa17.36■□□□□ 0.37
EDC3-215ENST00000569007 CHST15Q7LFX5 561 aaPredicted RBP17.36■□□□□ 0.37
EDC3-215ENST00000569007 B3GNT8Q7Z7M8 397 aa17.36■□□□□ 0.37
EDC3-215ENST00000569007 NAGSQ8N159 534 aa17.36■□□□□ 0.37
EDC3-215ENST00000569007 CCDC110Q8TBZ0 833 aa17.36■□□□□ 0.37
EDC3-215ENST00000569007 BLOC1S5Q8TDH9 187 aa17.36■□□□□ 0.37
EDC3-215ENST00000569007 GLYATL1Q969I3 302 aa17.36■□□□□ 0.37
EDC3-215ENST00000569007 SPATA13Q96N96 652 aa17.36■□□□□ 0.37
EDC3-215ENST00000569007 DCBLD2Q96PD2 775 aa17.36■□□□□ 0.37
EDC3-215ENST00000569007 FICDQ9BVA6 458 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms