RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 VPS18Q9P253 973 aa14.34□□□□□ -0.11
CMTM3-215ENST00000568477 EPN1Q9Y6I3 576 aaPredicted RBP14.34□□□□□ -0.11
CMTM3-215ENST00000568477 PMS2P1A4D2B8 440 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 SOWAHDA6NJG2 315 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 RHPN2P1A8MT19 583 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 PLD2O14939 933 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 ZW10O43264 779 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 TNFSF15O95150 251 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 ECEL1O95672 775 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 NDST3O95803 873 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 SLC4A1P02730 911 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 PIRTP0C851 137 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 FECHP22830 423 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 CCKBRP32239 447 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 LRP8Q14114 963 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 ZNF438Q7Z4V0 828 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 SPATA22Q8NHS9 363 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 KCNE4Q8WWG9 221 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 KRT35Q92764 455 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 HAUS1Q96CS2 278 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 PRR11Q96HE9 360 aaPredicted RBP14.33□□□□□ -0.12
CMTM3-215ENST00000568477 CALR3Q96L12 384 aaKnown RBP14.33□□□□□ -0.12
CMTM3-215ENST00000568477 GPR63Q9BZJ6 419 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 MAGEE1Q9HCI5 957 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 RAD18Q9NS91 495 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 KCND1Q9NSA2 647 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 ATXN7L1Q9ULK2 861 aaPredicted RBP14.33□□□□□ -0.12
CMTM3-215ENST00000568477 CNOT6Q9ULM6 557 aaKnown RBP14.33□□□□□ -0.12
CMTM3-215ENST00000568477 SHOC2Q9UQ13 582 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 ZNF711Q9Y462 761 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 PLEKHM1Q9Y4G2 1056 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 ST14Q9Y5Y6 855 aa14.33□□□□□ -0.12
CMTM3-215ENST00000568477 OAS3Q9Y6K5 1087 aaKnown RBP14.33□□□□□ -0.12
CMTM3-215ENST00000568477 FADS2P1A8MWK0 482 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 PMPCBO75439 489 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 MT-CYBP00156 380 aaPredicted RBP14.32□□□□□ -0.12
CMTM3-215ENST00000568477 ATP1A1P05023 1023 aaKnown RBP14.32□□□□□ -0.12
CMTM3-215ENST00000568477 ITGA2BP08514 1039 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 DCDC1P59894 354 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 B4GALNT1Q00973 533 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 TLE3Q04726 772 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 ADCY2Q08462 1091 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 WASHC5Q12768 1159 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 PPP2R5EQ16537 467 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 MAP9Q49MG5 647 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 ZNF569Q5MCW4 686 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 BROXQ5VW32 411 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 ALS2CLQ60I27 953 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 BBS12Q6ZW61 710 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 RAB11FIP2Q7L804 512 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 ZC3H18Q86VM9 953 aaKnown RBP14.32□□□□□ -0.12
CMTM3-215ENST00000568477 NAGSQ8N159 534 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 FBXO39Q8N4B4 442 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 PATE1Q8WXA2 126 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 QKIQ96PU8 341 aaKnown RBP eCLIP14.32□□□□□ -0.12
CMTM3-215ENST00000568477 SRPK1Q96SB4 655 aaKnown RBP14.32□□□□□ -0.12
CMTM3-215ENST00000568477 SPATA16Q9BXB7 569 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 PRORYQ9H606 182 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 RMI1Q9H9A7 625 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 KLHL8Q9P2G9 620 aaPredicted RBP14.32□□□□□ -0.12
CMTM3-215ENST00000568477 NFKBIL1Q9UBC1 381 aaPredicted RBP14.32□□□□□ -0.12
CMTM3-215ENST00000568477 FAM153AQ9UHL3 310 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 ZNHIT2Q9UHR6 403 aa14.32□□□□□ -0.12
CMTM3-215ENST00000568477 RCCD1A6NED2 376 aa14.31□□□□□ -0.12
CMTM3-215ENST00000568477 CDRT15L2A8MXV6 281 aa14.31□□□□□ -0.12
CMTM3-215ENST00000568477 HACD1B0YJ81 288 aa14.31□□□□□ -0.12
CMTM3-215ENST00000568477 DNAJC6O75061 913 aa14.31□□□□□ -0.12
CMTM3-215ENST00000568477 CPNE6O95741 557 aa14.31□□□□□ -0.12
CMTM3-215ENST00000568477 NFKB1P19838 968 aa14.31□□□□□ -0.12
CMTM3-215ENST00000568477 ALDH4A1P30038 563 aa14.31□□□□□ -0.12
CMTM3-215ENST00000568477 CD68P34810 354 aaPredicted RBP14.31□□□□□ -0.12
CMTM3-215ENST00000568477 CTNNA1P35221 906 aaKnown RBP14.31□□□□□ -0.12
CMTM3-215ENST00000568477 UGT1A5P35504 534 aa14.31□□□□□ -0.12
CMTM3-215ENST00000568477 TNNT3P45378 269 aaPredicted RBP14.31□□□□□ -0.12
CMTM3-215ENST00000568477 GPR3P46089 330 aa14.31□□□□□ -0.12
CMTM3-215ENST00000568477 NAP1L1P55209 391 aaKnown RBP14.31□□□□□ -0.12
CMTM3-215ENST00000568477 OR1D5P58170 312 aa14.31□□□□□ -0.12
CMTM3-215ENST00000568477 NR1D2Q14995 579 aa14.31□□□□□ -0.12
CMTM3-215ENST00000568477 AMZ1Q400G9 498 aa14.31□□□□□ -0.12
CMTM3-215ENST00000568477 CCDC181Q5TID7 509 aa14.31□□□□□ -0.12
CMTM3-215ENST00000568477 TMC3Q7Z5M5 1100 aa14.31□□□□□ -0.12
CMTM3-215ENST00000568477 CLEC14AQ86T13 490 aa14.31□□□□□ -0.12
CMTM3-215ENST00000568477 EID2BQ96D98 161 aa14.31□□□□□ -0.12
CMTM3-215ENST00000568477 CCDC97Q96F63 343 aaPredicted RBP14.31□□□□□ -0.12
CMTM3-215ENST00000568477 FCRL3Q96P31 734 aaPredicted RBP14.31□□□□□ -0.12
CMTM3-215ENST00000568477 VAT1Q99536 393 aa14.31□□□□□ -0.12
CMTM3-215ENST00000568477 ZSCAN5AQ9BUG6 496 aa14.31□□□□□ -0.12
CMTM3-215ENST00000568477 HEMGNQ9BXL5 484 aa14.31□□□□□ -0.12
CMTM3-215ENST00000568477 UBP1Q9NZI7 540 aa14.31□□□□□ -0.12
CMTM3-215ENST00000568477 APOC4-APOC2K7ER74 178 aa14.3□□□□□ -0.12
CMTM3-215ENST00000568477 KLK10O43240 276 aa14.3□□□□□ -0.12
CMTM3-215ENST00000568477 B4GAT1O43505 415 aa14.3□□□□□ -0.12
CMTM3-215ENST00000568477 APOC2P02655 101 aa14.3□□□□□ -0.12
CMTM3-215ENST00000568477 JMJD7P0C870 316 aa14.3□□□□□ -0.12
CMTM3-215ENST00000568477 UCNP55089 124 aa14.3□□□□□ -0.12
CMTM3-215ENST00000568477 WNT3AP56704 352 aa14.3□□□□□ -0.12
CMTM3-215ENST00000568477 COPS2P61201 443 aa14.3□□□□□ -0.12
CMTM3-215ENST00000568477 ZFP36L1Q07352 338 aaKnown RBP14.3□□□□□ -0.12
CMTM3-215ENST00000568477 CLPPQ16740 277 aaPredicted RBP14.3□□□□□ -0.12
CMTM3-215ENST00000568477 PHF19Q5T6S3 580 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms