RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 HGFP14210 728 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 ATP6V1B1P15313 513 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 CD1DP15813 335 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 ZNF37AP17032 561 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-250ENST00000568290 TCN1P20061 433 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-250ENST00000568290 LPOP22079 712 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-250ENST00000568290 GPX3P22352 226 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 GABRB3P28472 473 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 OR1E1P30953 314 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 AKT1P31749 480 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 GRIA3P42263 894 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 PTGER3P43115 390 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 PPP3CCP48454 512 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 ARHGDIAP52565 204 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 CDH4P55283 916 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 OXCT1P55809 520 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 MS4A2Q01362 244 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 CLCQ05315 142 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 CHRNB3Q05901 458 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 MERTKQ12866 999 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 SPIDRQ14159 915 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 CYTH1Q15438 398 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 TAF1CQ15572 869 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-250ENST00000568290 TTLL9Q3SXZ7 439 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 FAM26DQ5JW98 314 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 CDKL4Q5MAI5 379 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 PPM1LQ5SGD2 360 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 KIAA0319Q5VV43 1072 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 ALG1LQ6GMV1 187 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 C8orf82Q6P1X6 216 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-250ENST00000568290 PAOXQ6QHF9 649 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 AGMOQ6ZNB7 445 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 RNF165Q6ZSG1 346 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 FRA10AC1Q70Z53 315 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 GPRIN1Q7Z2K8 1008 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 PATL1Q86TB9 770 aaKnown RBP7.6□□□□□ -1.19
ATXN3-250ENST00000568290 ISCA2Q86U28 154 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 SVOPLQ8N434 492 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 PCDH20Q8N6Y1 951 aaKnown RBP7.6□□□□□ -1.19
ATXN3-250ENST00000568290 ZNF555Q8NEP9 628 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 VPS33AQ96AX1 596 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 TADA1Q96BN2 335 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 LRRC58Q96CX6 371 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 NMD3Q96D46 503 aaKnown RBP7.6□□□□□ -1.19
ATXN3-250ENST00000568290 SGF29Q96ES7 293 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 PPP1R36Q96LQ0 422 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 MYRFLQ96LU7 910 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 NSMCE2Q96MF7 247 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 TMEM209Q96SK2 561 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 PKMYT1Q99640 499 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 LBHD1Q9BQE6 289 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-250ENST00000568290 C1orf50Q9BV19 199 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 LRRC3Q9BY71 257 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 GRIP2Q9C0E4 1043 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 COQ10BQ9H8M1 238 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 CYP4F12Q9HCS2 524 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 TMPRSS4Q9NRS4 437 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 SMPD3Q9NY59 655 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-250ENST00000568290 MARCH2Q9P0N8 246 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 UBA2Q9UBT2 640 aaPredicted RBP7.6□□□□□ -1.19
ATXN3-250ENST00000568290 PHF24Q9UPV7 400 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 AURKCQ9UQB9 309 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 EIF3LQ9Y262 564 aaKnown RBP7.6□□□□□ -1.19
ATXN3-250ENST00000568290 FIS1Q9Y3D6 152 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 ZNF711Q9Y462 761 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 NR2E3Q9Y5X4 410 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 AP1M2Q9Y6Q5 423 aa7.6□□□□□ -1.19
ATXN3-250ENST00000568290 A0A1W2PQH9 124 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 FAM92AA1XBS5 289 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 ARNTLO00327 626 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 SLC28A1O00337 649 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 NR5A2O00482 541 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 RAD51BO15315 384 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 CLOCKO15516 846 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 RGS14O43566 566 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 MRPS14O60783 128 aaKnown RBP7.59□□□□□ -1.19
ATXN3-250ENST00000568290 CBFA2T3O75081 653 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 RNASEH2AO75792 299 aaKnown RBP7.59□□□□□ -1.19
ATXN3-250ENST00000568290 WDR47O94967 919 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 LATS1O95835 1130 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 OTCP00480 354 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 SMIM18P0DKX4 95 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 CDH2P19022 906 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-250ENST00000568290 PSMA3P25788 255 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 NFKBIAP25963 317 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 VARSP26640 1264 aaKnown RBP7.59□□□□□ -1.19
ATXN3-250ENST00000568290 ARNTP27540 789 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 MAPK1P28482 360 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 CAPGP40121 348 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 GRIA2P42262 883 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 ALDH3B2P48448 385 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 TUFMP49411 452 aaKnown RBP7.59□□□□□ -1.19
ATXN3-250ENST00000568290 TPD52P55327 224 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-250ENST00000568290 PLOD1Q02809 727 aaPredicted RBP7.59□□□□□ -1.19
ATXN3-250ENST00000568290 SREBF2Q12772 1141 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 IL18R1Q13478 541 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 CYP51A1Q16850 503 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 SLC39A12Q504Y0 691 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 UNC50Q53HI1 259 aa7.59□□□□□ -1.19
ATXN3-250ENST00000568290 MS4A13Q5J8X5 152 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms