RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 RIMKLBQ9ULI2 386 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 CHMP2BQ9UQN3 213 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 PCDH15Q96QU1 1955 aa11.41□□□□□ -0.58
KARS-207ENST00000566560 TMEM131Q92545 1883 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 KNL1Q8NG31 2342 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 FAM237BA0A1B0GVD1 139 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 POM121BA6NF01 834 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 FADS2P1A8MWK0 482 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 CACNB4O00305 520 aaPredicted RBP11.4□□□□□ -0.58
KARS-207ENST00000566560 INPP4BO15327 924 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 GPR39O43194 453 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 LMNAP02545 664 aaKnown RBP11.4□□□□□ -0.58
KARS-207ENST00000566560 CFIP05156 583 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 RETP07949 1114 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 THEGLP0DJG4 465 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 PAMP19021 973 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 ITGALP20701 1170 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 NMBRP28336 390 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 TEAD1P28347 426 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 MC4RP32245 332 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 RABIFP47224 123 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 ARSDP51689 593 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 THOP1P52888 689 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 C21orf59P57076 290 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 PFN3P60673 137 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 PRAMEP78395 509 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 CDK3Q00526 305 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 PDE1CQ14123 709 aaPredicted RBP11.4□□□□□ -0.58
KARS-207ENST00000566560 INPP5AQ14642 412 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 PDPK2PQ6A1A2 396 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 AFTPHQ6ULP2 937 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 CES3Q6UWW8 571 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 ADAMTSL4Q6UY14 1074 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 IQCHQ86VS3 1027 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 CCDC25Q86WR0 208 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 MFSD2AQ8NA29 543 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 OR13H1Q8NG92 308 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 FAM174AQ8TBP5 190 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 IFT81Q8WYA0 676 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 LRRC39Q96DD0 335 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 MFSD3Q96ES6 412 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 SIGLEC10Q96LC7 697 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 ZNF778Q96MU6 729 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 FMO2Q99518 471 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 WDR83Q9BRX9 315 aaKnown RBP11.4□□□□□ -0.58
KARS-207ENST00000566560 TRIM56Q9BRZ2 755 aaKnown RBP11.4□□□□□ -0.58
KARS-207ENST00000566560 FOXP3Q9BZS1 431 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 PHACTR1Q9C0D0 580 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 ARRDC1-AS1Q9H2J1 176 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 IL26Q9NPH9 171 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 GDF3Q9NR23 364 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 PHPT1Q9NRX4 125 aaPredicted RBP11.4□□□□□ -0.58
KARS-207ENST00000566560 TREX1Q9NSU2 369 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 ZDHHC18Q9NUE0 388 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 NCDNQ9UBB6 729 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 RAPGEFL1Q9UHV5 662 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 APPL1Q9UKG1 709 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 OR1A2Q9Y585 309 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 HS3ST3A1Q9Y663 406 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 RPS6KL1Q9Y6S9 549 aa11.4□□□□□ -0.58
KARS-207ENST00000566560 WDFY4Q6ZS81 3184 aa11.4□□□□□ -0.59
KARS-207ENST00000566560 A0A1W2PR77 199 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 E7ESA3 106 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 H7C0S8 307 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 GAPDHSO14556 408 aaPredicted RBP11.39□□□□□ -0.59
KARS-207ENST00000566560 TOR1BO14657 336 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 EIF3HO15372 352 aaKnown RBP eCLIP11.39□□□□□ -0.59
KARS-207ENST00000566560 MAGEC1O60732 1142 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 SRP72O76094 671 aaKnown RBP11.39□□□□□ -0.59
KARS-207ENST00000566560 USP1O94782 785 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 WNT1P04628 370 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 MYCLP1P12525 358 aaPredicted RBP11.39□□□□□ -0.59
KARS-207ENST00000566560 ELK3P41970 407 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 CSNK1EP49674 416 aaKnown RBP11.39□□□□□ -0.59
KARS-207ENST00000566560 KIAA1024LP59773 190 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 TUBB4BP68371 445 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 XIAPP98170 497 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 NHLH1Q02575 133 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 ACVR1Q04771 509 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 OVGP1Q12889 678 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 PEX6Q13608 980 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 ITGA9Q13797 1035 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 CRYMQ14894 314 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 NFATC4Q14934 902 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 FASTKD3Q14CZ7 662 aaKnown RBP11.39□□□□□ -0.59
KARS-207ENST00000566560 NR6A1Q15406 480 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 SMAD1Q15797 465 aaKnown RBP11.39□□□□□ -0.59
KARS-207ENST00000566560 CHRNA6Q15825 494 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 CCDC6Q16204 474 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 DUOXA1Q1HG43 343 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 ATP13A5Q4VNC0 1218 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 TRIM61Q5EBN2 209 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 ZRANB3Q5FWF4 1079 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 HP1BP3Q5SSJ5 553 aaPredicted RBP11.39□□□□□ -0.59
KARS-207ENST00000566560 KIAA0930Q6ICG6 404 aaPredicted RBP11.39□□□□□ -0.59
KARS-207ENST00000566560 Q6ZSR6 202 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 MICALCLQ6ZW33 695 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 TRIM74Q86UV6 250 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 NLRP8Q86W28 1048 aa11.39□□□□□ -0.59
KARS-207ENST00000566560 PHYKPLQ8IUZ5 450 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms