RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 INPP4BO15327 924 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 GLP2RO95838 553 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 CHEK2O96017 543 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 ALBP02768 609 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 CYBBP04839 570 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 CDH1P12830 882 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 MTHFD2P13995 350 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 ARSAP15289 507 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 RHOQP17081 205 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 MLLT6P55198 1093 aaPredicted RBP21.48■■□□□ 1.03
SPSB3-208ENST00000566339 KCNC4Q03721 635 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 EMX2Q04743 252 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 LIPEQ05469 1076 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 AARS2Q5JTZ9 985 aaKnown RBP21.48■■□□□ 1.03
SPSB3-208ENST00000566339 MARC1Q5VT66 337 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 GPR107Q5VW38 600 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 ANKS6Q68DC2 871 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 TMEM199Q8N511 208 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 DPP10Q8N608 796 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 MS4A4AQ96JQ5 239 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 SERPINB11Q96P15 392 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 TINF2Q9BSI4 451 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 DERL2Q9GZP9 239 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 TRIP12Q14669 1992 aaPredicted RBP21.48■■□□□ 1.03
SPSB3-208ENST00000566339 MLYCDO95822 493 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 HLA-DPA1P20036 260 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 TPP2P29144 1249 aaPredicted RBP21.48■■□□□ 1.03
SPSB3-208ENST00000566339 OXTRP30559 389 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 GRB7Q14451 532 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 XKR7Q5GH72 579 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 ANKRD26P1Q6NSI1 321 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 RPS27LQ71UM5 84 aaKnown RBP21.48■■□□□ 1.03
SPSB3-208ENST00000566339 GPR142Q7Z601 462 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 GALNT13Q8IUC8 556 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 HOMEZQ8IX15 550 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 OR6P1Q8NGX9 317 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 LRCH3Q96II8 777 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 ZNF599Q96NL3 588 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 PKMYT1Q99640 499 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 BCL7BQ9BQE9 202 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 DCUN1D5Q9BTE7 237 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 MUC3BQ9H195 1237 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 IFT80Q9P2H3 777 aaPredicted RBP21.48■■□□□ 1.03
SPSB3-208ENST00000566339 PAIP2BQ9ULR5 123 aaKnown RBP21.48■■□□□ 1.03
SPSB3-208ENST00000566339 GIT1Q9Y2X7 761 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 PCDHB3Q9Y5E6 796 aa21.48■■□□□ 1.03
SPSB3-208ENST00000566339 FAM234BA2RU67 622 aa21.47■■□□□ 1.03
SPSB3-208ENST00000566339 DEAF1O75398 565 aaPredicted RBP21.47■■□□□ 1.03
SPSB3-208ENST00000566339 KATNA1O75449 491 aa21.47■■□□□ 1.03
SPSB3-208ENST00000566339 RPS17P08708 135 aaKnown RBP21.47■■□□□ 1.03
SPSB3-208ENST00000566339 PSEN2P49810 448 aa21.47■■□□□ 1.03
SPSB3-208ENST00000566339 GABARAPL2P60520 117 aa21.47■■□□□ 1.03
SPSB3-208ENST00000566339 CLCQ05315 142 aa21.47■■□□□ 1.03
SPSB3-208ENST00000566339 NFATC3Q12968 1075 aa21.47■■□□□ 1.03
SPSB3-208ENST00000566339 TOP3AQ13472 1001 aaPredicted RBP21.47■■□□□ 1.03
SPSB3-208ENST00000566339 GEN1Q17RS7 908 aa21.47■■□□□ 1.03
SPSB3-208ENST00000566339 DCDC5Q6ZRR9 648 aa21.47■■□□□ 1.03
SPSB3-208ENST00000566339 FBXL20Q96IG2 436 aa21.47■■□□□ 1.03
SPSB3-208ENST00000566339 PHF12Q96QT6 1004 aa21.47■■□□□ 1.03
SPSB3-208ENST00000566339 AARSD1Q9BTE6 412 aaKnown RBP21.47■■□□□ 1.03
SPSB3-208ENST00000566339 TUBB1Q9H4B7 451 aa21.47■■□□□ 1.03
SPSB3-208ENST00000566339 RIC8BQ9NVN3 520 aa21.47■■□□□ 1.03
SPSB3-208ENST00000566339 SAGE1Q9NXZ1 904 aa21.47■■□□□ 1.03
SPSB3-208ENST00000566339 SFMBT1Q9UHJ3 866 aa21.47■■□□□ 1.03
SPSB3-208ENST00000566339 NYNRINQ9P2P1 1898 aaKnown RBP21.47■■□□□ 1.03
SPSB3-208ENST00000566339 FAM149AA5PLN7 773 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 MOXD2PA6NHM9 499 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 MAGEB3O15480 346 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 LDB2O43679 373 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 KLK8O60259 260 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 FGF1P05230 155 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 UROSP10746 265 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 CD9P21926 228 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 ALDH3A2P51648 485 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 CBX3Q13185 183 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 PCSK7Q16549 785 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 TYSND1Q2T9J0 566 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 TAF2Q6P1X5 1199 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 ANKRD23Q86SG2 305 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 RIMKLAQ8IXN7 391 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.46■■□□□ 1.03
SPSB3-208ENST00000566339 ACDQ96AP0 544 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 AURKBQ96GD4 344 aaPredicted RBP21.46■■□□□ 1.03
SPSB3-208ENST00000566339 TMEM209Q96SK2 561 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 LRRC3Q9BY71 257 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 ATXN3LQ9H3M9 355 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 IL1RL2Q9HB29 575 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 TMEM248Q9NWD8 314 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 GIN1Q9NXP7 522 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 GMPR2Q9P2T1 348 aaKnown RBP21.46■■□□□ 1.03
SPSB3-208ENST00000566339 LCHNA4D1U4 455 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 CCDC154A6NI56 674 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 ABCB7O75027 752 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 SLC22A3O75751 556 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 RPP40O75818 363 aaKnown RBP21.46■■□□□ 1.03
SPSB3-208ENST00000566339 MMP2P08253 660 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 TM4SF4P48230 202 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 CDH13P55290 713 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 SREBF2Q12772 1141 aa21.46■■□□□ 1.03
SPSB3-208ENST00000566339 CAPRIN1Q14444 709 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms