RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 PAPOLAP51003 745 aaKnown RBP6.21□□□□□ -1.42
UBFD1-204ENST00000565634 RPS6KA1Q15418 735 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 LRRC38Q5VT99 294 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 AFMIDQ63HM1 303 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 NUGGCQ68CJ6 796 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 NCBP2-AS2Q69YL0 99 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 LINGO4Q6UY18 593 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 TADA2BQ86TJ2 420 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 VASH2Q86V25 355 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 RFX6Q8HWS3 928 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 RHOT1Q8IXI2 618 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 RAVER1Q8IY67 606 aaKnown RBP6.21□□□□□ -1.42
UBFD1-204ENST00000565634 KATNAL2Q8IYT4 538 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 RCOR2Q8IZ40 523 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 CPXM2Q8N436 756 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 LRRN4CLQ8ND94 238 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 AGBL5Q8NDL9 886 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 FIBINQ8TAL6 211 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 CYB5D2Q8WUJ1 264 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 TEKT4Q8WW24 435 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 C1orf54Q8WWF1 131 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 ATG4AQ8WYN0 398 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 FAF2Q96CS3 445 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 HMCESQ96FZ2 354 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 PRR11Q96HE9 360 aaPredicted RBP6.21□□□□□ -1.42
UBFD1-204ENST00000565634 RPL10LQ96L21 214 aaKnown RBP6.21□□□□□ -1.42
UBFD1-204ENST00000565634 C16orf45Q96MC5 204 aaPredicted RBP6.21□□□□□ -1.42
UBFD1-204ENST00000565634 CCNL2Q96S94 520 aaPredicted RBP6.21□□□□□ -1.42
UBFD1-204ENST00000565634 FEM1AQ9BSK4 669 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 CALN1Q9BXU9 219 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 TSGA10Q9BZW7 698 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 LRRC19Q9H756 370 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 ABCB8Q9NUT2 735 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 TBC1D14Q9P2M4 693 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 SLC12A6Q9UHW9 1150 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 TBC1D30Q9Y2I9 924 aa6.21□□□□□ -1.42
UBFD1-204ENST00000565634 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.2□□□□□ -1.42
UBFD1-204ENST00000565634 WASH4PA8MWX3 477 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 RASA4BC9J798 803 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 MUSKO15146 869 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 HOXC11O43248 304 aaPredicted RBP6.2□□□□□ -1.42
UBFD1-204ENST00000565634 RASA4O43374 803 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 MFSD11O43934 449 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 CEP104O60308 925 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 OPA1O60313 960 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 CACNG3O60359 315 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 SYNCRIPO60506 623 aaKnown RBP6.2□□□□□ -1.42
UBFD1-204ENST00000565634 CST8O60676 142 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 ZNF821O75541 412 aaPredicted RBP6.2□□□□□ -1.42
UBFD1-204ENST00000565634 TNFSF15O95150 251 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 SEMA4FO95754 770 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 BPNT1O95861 308 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 PEX11BO96011 259 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 IGHV4-34P06331 123 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 KRT7P08729 469 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 FAM153BP0C7A2 387 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 ETS1P14921 441 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 CD27P26842 260 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 TNFRSF8P28908 595 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 RBMS1P29558 406 aaKnown RBP6.2□□□□□ -1.42
UBFD1-204ENST00000565634 CHKAP35790 457 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 KCNJ1P48048 391 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 HCAR3P49019 387 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 MLLT10P55197 1068 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 RWDD2BP57060 319 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 TPI1P60174 286 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 ERVPABLB-1P60509 514 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 ETF1P62495 437 aaKnown RBP6.2□□□□□ -1.42
UBFD1-204ENST00000565634 KLF1Q13351 362 aaPredicted RBP6.2□□□□□ -1.42
UBFD1-204ENST00000565634 ZNF177Q13360 481 aaPredicted RBP6.2□□□□□ -1.42
UBFD1-204ENST00000565634 SNX1Q13596 522 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 KRT81Q14533 505 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 ZNF234Q14588 700 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 STARD3Q14849 445 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 PTPRRQ15256 657 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 CYTH1Q15438 398 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 HADHQ16836 314 aaKnown RBP6.2□□□□□ -1.42
UBFD1-204ENST00000565634 INAVAQ3KP66 663 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 POM121L1PQ3SYA9 428 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 MPPE1Q53F39 396 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 ZFYVE27Q5T4F4 411 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 PAPD7Q5XG87 772 aaKnown RBP6.2□□□□□ -1.42
UBFD1-204ENST00000565634 SLC9A4Q6AI14 798 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 MICALCLQ6ZW33 695 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 ZSCAN30Q86W11 494 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 DDX42Q86XP3 938 aaKnown RBP eCLIP6.2□□□□□ -1.42
UBFD1-204ENST00000565634 SPATS2Q86XZ4 545 aaKnown RBP6.2□□□□□ -1.42
UBFD1-204ENST00000565634 CREG2Q8IUH2 290 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 GLIS1Q8NBF1 620 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 EXD1Q8NHP7 514 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 GANCQ8TET4 914 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 HTR3CQ8WXA8 447 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 JPH3Q8WXH2 748 aaPredicted RBP6.2□□□□□ -1.42
UBFD1-204ENST00000565634 ARHGEF2Q92974 986 aaKnown RBP6.2□□□□□ -1.42
UBFD1-204ENST00000565634 ARRDC3Q96B67 414 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 TBC1D31Q96DN5 1066 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 WDR89Q96FK6 387 aaPredicted RBP6.2□□□□□ -1.42
UBFD1-204ENST00000565634 MRGPRX3Q96LB0 322 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 SLC46A1Q96NT5 459 aa6.2□□□□□ -1.42
UBFD1-204ENST00000565634 OSBPL9Q96SU4 736 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms