RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 TAAR9Q96RI9 348 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 WDR24Q96S15 920 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 DPYSL5Q9BPU6 564 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 BRD8Q9H0E9 1235 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 RMI1Q9H9A7 625 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 MAGEE1Q9HCI5 957 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 TRIM39Q9HCM9 518 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 ARFGAP3Q9NP61 516 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 RAD18Q9NS91 495 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 SLC39A1Q9NY26 324 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 FOXJ2Q9P0K8 574 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 ATXN10Q9UBB4 475 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 SAE1Q9UBE0 346 aaPredicted RBP6.36□□□□□ -1.39
TCF4-228ENST00000565393 TBC1D29Q9UFV1 150 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 CNOT6Q9ULM6 557 aaKnown RBP6.36□□□□□ -1.39
TCF4-228ENST00000565393 NENFQ9UMX5 172 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 KCNK6Q9Y257 313 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 ST14Q9Y5Y6 855 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 WDR87Q6ZQQ6 2873 aa6.36□□□□□ -1.39
TCF4-228ENST00000565393 PTPRBP23467 1997 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 MAP1BP46821 2468 aaKnown RBP6.35□□□□□ -1.39
TCF4-228ENST00000565393 ADAMTS20P59510 1910 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 TPRP12270 2363 aaKnown RBP6.35□□□□□ -1.39
TCF4-228ENST00000565393 IGHV1OR21-1A0A087WYE8 117 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 A0A0A6YYK5 440 aaPredicted RBP6.35□□□□□ -1.39
TCF4-228ENST00000565393 C3orf70A6NLC5 250 aaPredicted RBP6.35□□□□□ -1.39
TCF4-228ENST00000565393 EFCAB7A8K855 629 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 FADS2P1A8MWK0 482 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 C9orf172C9J069 976 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 HGSO14964 777 aaPredicted RBP6.35□□□□□ -1.39
TCF4-228ENST00000565393 CST8O60676 142 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 MFAP3LO75121 409 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 C1QL1O75973 258 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 CDK14O94921 469 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 ZRANB2O95218 330 aaKnown RBP eCLIP6.35□□□□□ -1.39
TCF4-228ENST00000565393 ZIC2O95409 532 aaPredicted RBP6.35□□□□□ -1.39
TCF4-228ENST00000565393 EML2O95834 649 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 MT-CYBP00156 380 aaPredicted RBP6.35□□□□□ -1.39
TCF4-228ENST00000565393 MMP2P08253 660 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 LIPCP11150 499 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 SLC2A4P14672 509 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 ZNF8P17098 575 aaPredicted RBP6.35□□□□□ -1.39
TCF4-228ENST00000565393 COMTP21964 271 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 NR2C2P49116 596 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 ATP1A2P50993 1020 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 NAP1L1P55209 391 aaKnown RBP6.35□□□□□ -1.39
TCF4-228ENST00000565393 GPLD1P80108 840 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 IFI35P80217 286 aaPredicted RBP6.35□□□□□ -1.39
TCF4-228ENST00000565393 HHEXQ03014 270 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 SQSTM1Q13501 440 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 TRA2AQ13595 282 aaKnown RBP eCLIP6.35□□□□□ -1.39
TCF4-228ENST00000565393 TFDP2Q14188 446 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 NR1D2Q14995 579 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 DCAF12Q5T6F0 453 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 HENMT1Q5T8I9 393 aaKnown RBP6.35□□□□□ -1.39
TCF4-228ENST00000565393 CCDC181Q5TID7 509 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 LRRC38Q5VT99 294 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 SLC9A4Q6AI14 798 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 PCSK4Q6UW60 755 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 MFSD7Q6UXD7 560 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 ZNF438Q7Z4V0 828 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 TMC3Q7Z5M5 1100 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 VASH2Q86V25 355 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 CNGA4Q8IV77 575 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 CCDC50Q8IVM0 306 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 SLITRK4Q8IW52 837 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 RCOR2Q8IZ40 523 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 SFRP1Q8N474 314 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 SLC25A41Q8N5S1 370 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 IL22RA1Q8N6P7 574 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 GPR26Q8NDV2 337 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 GDAP1Q8TB36 358 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 SLC37A2Q8TED4 501 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 SNRNP27Q8WVK2 155 aaKnown RBP6.35□□□□□ -1.39
TCF4-228ENST00000565393 TFB1MQ8WVM0 346 aaKnown RBP6.35□□□□□ -1.39
TCF4-228ENST00000565393 P3H4Q92791 437 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 EXTL1Q92935 676 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 ART4Q93070 314 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 SGF29Q96ES7 293 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 IMP4Q96G21 291 aaKnown RBP6.35□□□□□ -1.39
TCF4-228ENST00000565393 LYSMD1Q96S90 227 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 SRPK1Q96SB4 655 aaKnown RBP6.35□□□□□ -1.39
TCF4-228ENST00000565393 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.35□□□□□ -1.39
TCF4-228ENST00000565393 ASPSCR1Q9BZE9 553 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 TRIM5Q9C035 493 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 SLC25A51Q9H1U9 297 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 OR2AG1Q9H205 316 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 CARD9Q9H257 536 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 OSGEPL1Q9H4B0 414 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 GLOD4Q9HC38 313 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 BPIFA1Q9NP55 256 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 PRDM8Q9NQV8 689 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 KLC4Q9NSK0 619 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 OCIAD1Q9NX40 245 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 TMEM9Q9P0T7 183 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 VPS18Q9P253 973 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 TRIM10Q9UDY6 481 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 KLHL3Q9UH77 587 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 INTUQ9ULD6 942 aa6.35□□□□□ -1.39
TCF4-228ENST00000565393 SSUH2Q9Y2M2 353 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms