RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 FANCCQ00597 558 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 GBE1Q04446 702 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 LRP8Q14114 963 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 IFI16Q16666 785 aaKnown RBP8.51□□□□□ -1.05
CAPN3-213ENST00000565173 QPCTQ16769 361 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 TDRD12Q587J7 1177 aaKnown RBP8.51□□□□□ -1.05
CAPN3-213ENST00000565173 FAM182AQ5T1J6 154 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 HENMT1Q5T8I9 393 aaKnown RBP8.51□□□□□ -1.05
CAPN3-213ENST00000565173 TIGD7Q6NT04 549 aaPredicted RBP8.51□□□□□ -1.05
CAPN3-213ENST00000565173 CAVIN1Q6NZI2 390 aaKnown RBP8.51□□□□□ -1.05
CAPN3-213ENST00000565173 WDR74Q6RFH5 385 aaPredicted RBP8.51□□□□□ -1.05
CAPN3-213ENST00000565173 ARHGAP22Q7Z5H3 698 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 ZNF761Q86XN6 746 aaPredicted RBP8.51□□□□□ -1.05
CAPN3-213ENST00000565173 GALNT13Q8IUC8 556 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 CNTD1Q8N815 330 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 ZSCAN1Q8NBB4 408 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 KCTD6Q8NC69 237 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 CPLX3Q8WVH0 158 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 ART4Q93070 314 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 SLC38A3Q99624 504 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 DPYSL5Q9BPU6 564 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 ZNF670Q9BS34 389 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 DDA1Q9BW61 102 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 CBX8Q9HC52 389 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 PCDH9Q9HC56 1237 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 GEMIN8Q9NWZ8 242 aaKnown RBP8.51□□□□□ -1.05
CAPN3-213ENST00000565173 DTLQ9NZJ0 730 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 VPS18Q9P253 973 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 IL17BQ9UHF5 180 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 ZNHIT2Q9UHR6 403 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 PILRAQ9UKJ1 303 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 RPL26L1Q9UNX3 145 aaKnown RBP8.51□□□□□ -1.05
CAPN3-213ENST00000565173 MAST4O15021 2626 aa8.51□□□□□ -1.05
CAPN3-213ENST00000565173 EFCAB7A8K855 629 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 PROSCO94903 275 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 ASMTLO95671 621 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 JCHAINP01591 159 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 GYPCP04921 128 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 SFTPCP11686 197 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 LIFP15018 202 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 HNRNPH3P31942 346 aaKnown RBP8.5□□□□□ -1.05
CAPN3-213ENST00000565173 SSR1P43307 286 aaKnown RBP8.5□□□□□ -1.05
CAPN3-213ENST00000565173 CSRP3P50461 194 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 EPHB1P54762 984 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 UBASH3AP57075 661 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 HHEXQ03014 270 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 BIRC2Q13490 618 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 PDK2Q15119 407 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 NFKBIBQ15653 356 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 HADHQ16836 314 aaKnown RBP8.5□□□□□ -1.05
CAPN3-213ENST00000565173 DCAF12Q5T6F0 453 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 ANKS6Q68DC2 871 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 CHST15Q7LFX5 561 aaPredicted RBP8.5□□□□□ -1.05
CAPN3-213ENST00000565173 PRICKLE2Q7Z3G6 844 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 LUZP1Q86V48 1076 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 ZNF564Q8TBZ8 553 aaPredicted RBP8.5□□□□□ -1.05
CAPN3-213ENST00000565173 RAPGEF5Q92565 580 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 COL26A1Q96A83 441 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 HDAC11Q96DB2 347 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 TRIB3Q96RU7 358 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 ARHGAP9Q9BRR9 750 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 PACSIN1Q9BY11 444 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 ASPSCR1Q9BZE9 553 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 FAM117AQ9C073 453 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 FAM83DQ9H4H8 585 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 SARS2Q9NP81 518 aaKnown RBP8.5□□□□□ -1.05
CAPN3-213ENST00000565173 SLC39A1Q9NY26 324 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 DNPEPQ9ULA0 475 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 ADGRG1Q9Y653 693 aa8.5□□□□□ -1.05
CAPN3-213ENST00000565173 ZFC3H1O60293 1989 aaKnown RBP8.5□□□□□ -1.05
CAPN3-213ENST00000565173 C1orf232A0A0U1RR37 186 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 RGSL1A5PLK6 1076 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 C3orf70A6NLC5 250 aaPredicted RBP8.49□□□□□ -1.05
CAPN3-213ENST00000565173 A8MU76 341 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 KCNK1O00180 336 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 GRID2O43424 1007 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 DUX1O43812 170 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 NUAK1O60285 661 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 RAD1O60671 282 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 F3P13726 295 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 ZNF8P17098 575 aaPredicted RBP8.49□□□□□ -1.05
CAPN3-213ENST00000565173 MX2P20592 715 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 KDELR1P24390 212 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 GJC1P36383 396 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 CD86P42081 329 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 ATP1A2P50993 1020 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 RAB15P59190 212 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 IFI35P80217 286 aaPredicted RBP8.49□□□□□ -1.05
CAPN3-213ENST00000565173 MC2RQ01718 297 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 PPIDQ08752 370 aaKnown RBP8.49□□□□□ -1.05
CAPN3-213ENST00000565173 ZBTB17Q13105 803 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 NFATC2Q13469 925 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 ASTE1Q2TB18 679 aaPredicted RBP8.49□□□□□ -1.05
CAPN3-213ENST00000565173 BORAQ6PGQ7 559 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 LYSMD3Q7Z3D4 306 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 TIPARPQ7Z3E1 657 aaKnown RBP8.49□□□□□ -1.05
CAPN3-213ENST00000565173 CCDC13Q8IYE1 715 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 CACNA2D3Q8IZS8 1091 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 IL22RA1Q8N6P7 574 aa8.49□□□□□ -1.05
CAPN3-213ENST00000565173 PLD5Q8N7P1 536 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms