RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 EML2O95834 649 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 MT-CYBP00156 380 aaPredicted RBP9.95□□□□□ -0.82
CMTM3-209ENST00000565003 SLC4A1P02730 911 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 PRB1P04280 392 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 JMJD7P0C870 316 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 PTPN3P26045 913 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 ALDH4A1P30038 563 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 ETV5P41161 510 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 MAGEA1P43355 309 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 HADHBP55084 474 aaKnown RBP9.95□□□□□ -0.82
CMTM3-209ENST00000565003 UCNP55089 124 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 ODF2Q5BJF6 829 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 PHF19Q5T6S3 580 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 ARHGAP40Q5TG30 622 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 KAZNQ674X7 775 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 SPOCD1Q6ZMY3 1216 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 ZNF574Q6ZN55 896 aaPredicted RBP9.95□□□□□ -0.82
CMTM3-209ENST00000565003 USP53Q70EK8 1073 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 GALNT13Q8IUC8 556 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 GPR26Q8NDV2 337 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 CCHCR1Q8TD31 782 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 SLC25A51Q9H1U9 297 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 ZFYVE1Q9HBF4 777 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 GLOD4Q9HC38 313 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 VPS18Q9P253 973 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 SHOC2Q9UQ13 582 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 ALG6Q9Y672 507 aa9.95□□□□□ -0.82
CMTM3-209ENST00000565003 A0A0A6YYK5 440 aaPredicted RBP9.94□□□□□ -0.82
CMTM3-209ENST00000565003 PRAMEF33A0A0G2JMD5 474 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 RGSL1A5PLK6 1076 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 CST8O60676 142 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 PRAMEF10O60809 474 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 C1QL1O75973 258 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 CD1CP29017 333 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 CSF2RBP32927 897 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 CD68P34810 354 aaPredicted RBP9.94□□□□□ -0.82
CMTM3-209ENST00000565003 GPR3P46089 330 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 DCDC1P59894 354 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 CFHR1Q03591 330 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 CDK18Q07002 472 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 VAC14Q08AM6 782 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 WASHC5Q12768 1159 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 BIRC2Q13490 618 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 LRP8Q14114 963 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 C16orf72Q14CZ0 275 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 SLC14A2Q15849 920 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 TEX44Q53QW1 395 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 ZNF648Q5T619 568 aaPredicted RBP9.94□□□□□ -0.82
CMTM3-209ENST00000565003 NKAIN2Q5VXU1 208 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 ALS2CLQ60I27 953 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 CHST15Q7LFX5 561 aaPredicted RBP9.94□□□□□ -0.82
CMTM3-209ENST00000565003 TMC3Q7Z5M5 1100 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 PIM3Q86V86 326 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 ZNF761Q86XN6 746 aaPredicted RBP9.94□□□□□ -0.82
CMTM3-209ENST00000565003 JAMLQ86YT9 394 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 SFRP1Q8N474 314 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 RCBTB1Q8NDN9 531 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 SLC37A2Q8TED4 501 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 TFB1MQ8WVM0 346 aaKnown RBP9.94□□□□□ -0.82
CMTM3-209ENST00000565003 SLC39A7Q92504 469 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 TMEM159Q96B96 161 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 HAUS1Q96CS2 278 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 CCDC97Q96F63 343 aaPredicted RBP9.94□□□□□ -0.82
CMTM3-209ENST00000565003 TEKT5Q96M29 485 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 CMKLR1Q99788 373 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 MAGEE1Q9HCI5 957 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 ARFGAP3Q9NP61 516 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 UBP1Q9NZI7 540 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 FOXJ2Q9P0K8 574 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 ZNHIT2Q9UHR6 403 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 ACSL6Q9UKU0 697 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 KCNK6Q9Y257 313 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 ZNF711Q9Y462 761 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 PCDHA13Q9Y5I0 950 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 SPO11Q9Y5K1 396 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 BPTFQ12830 3046 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 BAHCC1Q9P281 2608 aa9.94□□□□□ -0.82
CMTM3-209ENST00000565003 TRBV23OR9-2A0A075B6M9 112 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 hCG_1818297A0A087WSY0 165 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 IGHV1OR21-1A0A087WYE8 117 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 IGHV5-10-1A0A0J9YXX1 117 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 A6NCN8 305 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 RCCD1A6NED2 376 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 EIF4E1BA6NMX2 242 aaKnown RBP9.93□□□□□ -0.82
CMTM3-209ENST00000565003 F5H423 210 aaPredicted RBP9.93□□□□□ -0.82
CMTM3-209ENST00000565003 K7ENP7 123 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 AURKAO14965 403 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 NVLO15381 856 aaKnown RBP9.93□□□□□ -0.82
CMTM3-209ENST00000565003 NUAK1O60285 661 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 PMPCBO75439 489 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 NDST3O95803 873 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 CCL4P13236 92 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 ACP5P13686 325 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 ZNF8P17098 575 aaPredicted RBP9.93□□□□□ -0.82
CMTM3-209ENST00000565003 BPIP17213 487 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 NFKB1P19838 968 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 FASLGP48023 281 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 NR2C2P49116 596 aa9.93□□□□□ -0.82
CMTM3-209ENST00000565003 SRSF6Q13247 344 aaKnown RBP9.93□□□□□ -0.82
CMTM3-209ENST00000565003 PEX6Q13608 980 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms