RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 PTPRRQ15256 657 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 QPCTQ16769 361 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 HENMT1Q5T8I9 393 aaKnown RBP12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 PDPK2PQ6A1A2 396 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 CCDC70Q6NSX1 233 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 DOK6Q6PKX4 331 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 WDR74Q6RFH5 385 aaPredicted RBP12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 TMPRSS9Q7Z410 1059 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 NT5DC3Q86UY8 548 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 DTX1Q86Y01 620 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 SFRP1Q8N474 314 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 PLD5Q8N7P1 536 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 AGBL5Q8NDL9 886 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 OR10G6Q8NH81 332 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 PTCD2Q8WV60 388 aaKnown RBP12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 SGF29Q96ES7 293 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 MED8Q96G25 268 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 HERPUD2Q9BSE4 406 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 PACSIN1Q9BY11 444 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 ASPSCR1Q9BZE9 553 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 CARD9Q9H257 536 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 EPB41L1Q9H4G0 881 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 STN1Q9H668 368 aaKnown RBP12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 SUDS3Q9H7L9 328 aaPredicted RBP12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 RDH14Q9HBH5 336 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 SARS2Q9NP81 518 aaKnown RBP12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 DDX56Q9NY93 547 aaKnown RBP12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 KCNK4Q9NYG8 393 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 ST14Q9Y5Y6 855 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 SCN8AQ9UQD0 1980 aa12.09□□□□□ -0.47
GTF3C1-204ENST00000564664 ATMQ13315 3056 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 PRAMEF33A0A0G2JMD5 474 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 LRRD1A4D1F6 860 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 C9orf172C9J069 976 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 STMND1H3BQB6 276 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 APOL1O14791 398 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 INPP4BO15327 924 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 PRAMEF10O60809 474 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 MAP3K6O95382 1288 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 ITIH1P19827 911 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 CSTF2P33240 577 aaKnown RBP eCLIP12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 CD86P42081 329 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 NR2C2P49116 596 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 MAPK10P53779 464 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 AP1B1Q10567 949 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 C16orf72Q14CZ0 275 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 MANEAQ5SRI9 462 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 IYDQ6PHW0 289 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 LYSMD3Q7Z3D4 306 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 SLC9B2Q86UD5 537 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 CNTD1Q8N815 330 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 IMP4Q96G21 291 aaKnown RBP12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 AHCYL2Q96HN2 611 aaKnown RBP12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 WDR24Q96S15 920 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 AGAP2Q99490 1192 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 SLC38A3Q99624 504 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 NUDT22Q9BRQ3 303 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 ZSCAN5AQ9BUG6 496 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 DDA1Q9BW61 102 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 SLC25A51Q9H1U9 297 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 NHEJ1Q9H9Q4 299 aaPredicted RBP12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 ZFYVE1Q9HBF4 777 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 TRIM39Q9HCM9 518 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 NFKBIL1Q9UBC1 381 aaPredicted RBP12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 HEY1Q9Y5J3 304 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 CFAP46Q8IYW2 2715 aa12.08□□□□□ -0.48
GTF3C1-204ENST00000564664 KIR2DS5A0A0G2JLQ3 304 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 A0A0G2JNG1 304 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 A0A0U1RQS6 177 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 C3orf70A6NLC5 250 aaPredicted RBP12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 B4E171 279 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 B8ZZF3 427 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 KIR2DS3K7RE56 304 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 KCNK1O00180 336 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 DUX1O43812 170 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 NUAK1O60285 661 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 THRAP10827 490 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 ETV5P41161 510 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 TSPAN7P41732 249 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 EPHA4P54764 986 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 RAB15P59190 212 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 DCDC1P59894 354 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 CDK18Q07002 472 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 TFDP2Q14188 446 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 KIR2DS5Q14953 304 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 TEX44Q53QW1 395 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 MARK2Q7KZI7 788 aaKnown RBP12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 TMC3Q7Z5M5 1100 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 CPNE8Q86YQ8 564 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 CNGA4Q8IV77 575 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 VSTM4Q8IW00 320 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 RHOT1Q8IXI2 618 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 PATE1Q8WXA2 126 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 TADA1Q96BN2 335 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 CCDC74BQ96LY2 380 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 OLFM3Q96PB7 478 aa12.07□□□□□ -0.48
GTF3C1-204ENST00000564664 TEFMQ96QE5 360 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms