RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 A0A1W2PQU0 124 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 PRR23AA6NEV1 266 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 FAM47DPA6NHR8 397 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 HMGB1P1B2RPK0 211 aaPredicted RBP12.74□□□□□ -0.37
CLK3-214ENST00000564096 RNGTTO60942 597 aaKnown RBP12.74□□□□□ -0.37
CLK3-214ENST00000564096 PIAS1O75925 651 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 SEMA4FO95754 770 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 DCNP07585 359 aaKnown RBP12.74□□□□□ -0.37
CLK3-214ENST00000564096 ITGA2BP08514 1039 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 SNRPAP09012 282 aaKnown RBP12.74□□□□□ -0.37
CLK3-214ENST00000564096 RALBP11234 206 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 ZNF7P17097 686 aaPredicted RBP12.74□□□□□ -0.37
CLK3-214ENST00000564096 CD6P30203 668 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 PTGER3P43115 390 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 LEPRP48357 1165 aaKnown RBP12.74□□□□□ -0.37
CLK3-214ENST00000564096 POLD2P49005 469 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 SERPINB8P50452 374 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 SLC12A2P55011 1212 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 DPTQ07507 201 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 DNAJC3Q13217 504 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 CTBP1Q13363 440 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 AGERQ15109 404 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 AGBL2Q5U5Z8 902 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 PSAPL1Q6NUJ1 521 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 MTERF4Q7Z6M4 381 aaKnown RBP12.74□□□□□ -0.37
CLK3-214ENST00000564096 NLRP8Q86W28 1048 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 NXPE1Q8N323 547 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 DENND6BQ8NEG7 585 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 GDAP1Q8TB36 358 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 TSPAN17Q96FV3 270 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 DCUN1D1Q96GG9 259 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 VPS39Q96JC1 886 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 VPS35Q96QK1 796 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 COPS8Q99627 209 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 RIOK2Q9BVS4 552 aaKnown RBP12.74□□□□□ -0.37
CLK3-214ENST00000564096 TMBIM4Q9HC24 238 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 ITM2CQ9NQX7 267 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 FBXO6Q9NRD1 293 aaPredicted RBP12.74□□□□□ -0.37
CLK3-214ENST00000564096 SPATA6Q9NWH7 488 aaPredicted RBP12.74□□□□□ -0.37
CLK3-214ENST00000564096 MARCH4Q9P2E8 410 aaPredicted RBP12.74□□□□□ -0.37
CLK3-214ENST00000564096 CTNNAL1Q9UBT7 734 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 EBF1Q9UH73 591 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 CYP8B1Q9UNU6 501 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 PSAT1Q9Y617 370 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 COMMD10Q9Y6G5 202 aa12.74□□□□□ -0.37
CLK3-214ENST00000564096 TRBV5-4A0A0C4DH59 114 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 UBA6A0AVT1 1052 aaPredicted RBP12.73□□□□□ -0.37
CLK3-214ENST00000564096 TMEM221A6NGB7 291 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 IGLON5A6NGN9 336 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 H3BMM5 538 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 M0R296 226 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 AGPSO00116 658 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 QSOX1O00391 747 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 GAPDHSO14556 408 aaPredicted RBP12.73□□□□□ -0.37
CLK3-214ENST00000564096 GCAP28676 217 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 AKT1P31749 480 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 NUDT1P36639 197 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 GPR1P46091 355 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 LRRC14Q15048 493 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 TMEM259Q4ZIN3 620 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 LDLRAP1Q5SW96 308 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 SEL1L3Q68CR1 1132 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 FAM45BPQ6NSW5 357 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 MAMSTRQ6ZN01 415 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 ZC3HC1Q86WB0 502 aaKnown RBP12.73□□□□□ -0.37
CLK3-214ENST00000564096 SERPINA9Q86WD7 417 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 GPATCH11Q8N954 259 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 DDHD1Q8NEL9 900 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 FAM45AQ8TCE6 357 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 ASB12Q8WXK4 309 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 ATXN7L3BQ96GX2 97 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 ATP6V1G3Q96LB4 118 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 GPR22Q99680 433 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 TSSK1BQ9BXA7 367 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 CLPBQ9H078 707 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 ABCG8Q9H221 673 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 EURLQ9NYK6 297 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 GNPTGQ9UJJ9 305 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 COQ6Q9Y2Z9 468 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 PCDHB1Q9Y5F3 818 aa12.73□□□□□ -0.37
CLK3-214ENST00000564096 ZNF106Q9H2Y7 1883 aaKnown RBP12.73□□□□□ -0.37
CLK3-214ENST00000564096 SCN8AQ9UQD0 1980 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 FAM95CA0A1B0GW59 222 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 TRIM49D1C9J1S8 452 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 PRMT5O14744 637 aaPredicted RBP12.72□□□□□ -0.37
CLK3-214ENST00000564096 UGT1A9O60656 530 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 NDUFS2O75306 463 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 ESR1P03372 595 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 MT-ND3P03897 115 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 PCCBP05166 539 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 GM2AP17900 193 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 MSH3P20585 1137 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 RPS3P23396 243 aaKnown RBP eCLIP12.72□□□□□ -0.37
CLK3-214ENST00000564096 TEAD1P28347 426 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 NSG1P42857 185 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 ADARP55265 1226 aaKnown RBP12.72□□□□□ -0.37
CLK3-214ENST00000564096 BMPR2Q13873 1038 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 GTF2H3Q13889 308 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 SEMA3AQ14563 771 aa12.72□□□□□ -0.37
CLK3-214ENST00000564096 DBN1Q16643 649 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms