RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 DCDC1P59894 354 aa30.5■■■□□ 2.47
CMTM4-204ENST00000563952 SLC1A5Q15758 541 aa30.5■■■□□ 2.47
CMTM4-204ENST00000563952 ZNF569Q5MCW4 686 aa30.5■■■□□ 2.47
CMTM4-204ENST00000563952 ANKRD20A2Q5SQ80 823 aa30.5■■■□□ 2.47
CMTM4-204ENST00000563952 ANKRD20A1Q5TYW2 823 aa30.5■■■□□ 2.47
CMTM4-204ENST00000563952 ANKRD20A3Q5VUR7 823 aa30.5■■■□□ 2.47
CMTM4-204ENST00000563952 VPS18Q9P253 973 aa30.5■■■□□ 2.47
CMTM4-204ENST00000563952 RAXQ9Y2V3 346 aa30.5■■■□□ 2.47
CMTM4-204ENST00000563952 PRKAB1Q9Y478 270 aa30.5■■■□□ 2.47
CMTM4-204ENST00000563952 WDFY3Q8IZQ1 3526 aa30.5■■■□□ 2.47
CMTM4-204ENST00000563952 COL27A1Q8IZC6 1860 aaPredicted RBP30.49■■■□□ 2.47
CMTM4-204ENST00000563952 USP12O75317 370 aa30.49■■■□□ 2.47
CMTM4-204ENST00000563952 ANXA9O76027 345 aa30.49■■■□□ 2.47
CMTM4-204ENST00000563952 FGF1P05230 155 aa30.49■■■□□ 2.47
CMTM4-204ENST00000563952 BPIP17213 487 aa30.49■■■□□ 2.47
CMTM4-204ENST00000563952 ACTR1BP42025 376 aa30.49■■■□□ 2.47
CMTM4-204ENST00000563952 GEMP55040 296 aa30.49■■■□□ 2.47
CMTM4-204ENST00000563952 ACTR1AP61163 376 aa30.49■■■□□ 2.47
CMTM4-204ENST00000563952 SPIDRQ14159 915 aa30.49■■■□□ 2.47
CMTM4-204ENST00000563952 HLTFQ14527 1009 aaKnown RBP eCLIP30.49■■■□□ 2.47
CMTM4-204ENST00000563952 RTP5Q14D33 572 aa30.49■■■□□ 2.47
CMTM4-204ENST00000563952 ISXQ2M1V0 245 aa30.49■■■□□ 2.47
CMTM4-204ENST00000563952 CERCAMQ5T4B2 595 aa30.49■■■□□ 2.47
CMTM4-204ENST00000563952 Q8N9G6 341 aaPredicted RBP30.49■■■□□ 2.47
CMTM4-204ENST00000563952 WDR48Q8TAF3 677 aa30.49■■■□□ 2.47
CMTM4-204ENST00000563952 CCDC110Q8TBZ0 833 aa30.49■■■□□ 2.47
CMTM4-204ENST00000563952 BLOC1S5Q8TDH9 187 aa30.49■■■□□ 2.47
CMTM4-204ENST00000563952 GORASP1Q9BQQ3 440 aa30.49■■■□□ 2.47
CMTM4-204ENST00000563952 ZSCAN5AQ9BUG6 496 aa30.49■■■□□ 2.47
CMTM4-204ENST00000563952 FICDQ9BVA6 458 aa30.49■■■□□ 2.47
CMTM4-204ENST00000563952 ARFGAP3Q9NP61 516 aa30.49■■■□□ 2.47
CMTM4-204ENST00000563952 RNF215Q9Y6U7 377 aa30.49■■■□□ 2.47
CMTM4-204ENST00000563952 ARHGEF17Q96PE2 2063 aaPredicted RBP30.49■■■□□ 2.47
CMTM4-204ENST00000563952 SCN8AQ9UQD0 1980 aa30.48■■■□□ 2.47
CMTM4-204ENST00000563952 TCEA3O75764 348 aa30.48■■■□□ 2.47
CMTM4-204ENST00000563952 RPLP0P05388 317 aaKnown RBP30.48■■■□□ 2.47
CMTM4-204ENST00000563952 GLB1P16278 677 aa30.48■■■□□ 2.47
CMTM4-204ENST00000563952 HLA-DPA1P20036 260 aa30.48■■■□□ 2.47
CMTM4-204ENST00000563952 PSMB4P28070 264 aa30.48■■■□□ 2.47
CMTM4-204ENST00000563952 MAZP56270 477 aaKnown RBP30.48■■■□□ 2.47
CMTM4-204ENST00000563952 TRAM1L1Q8N609 369 aa30.48■■■□□ 2.47
CMTM4-204ENST00000563952 TTC13Q8NBP0 860 aa30.48■■■□□ 2.47
CMTM4-204ENST00000563952 LRIT1Q9P2V4 623 aa30.48■■■□□ 2.47
CMTM4-204ENST00000563952 NFKBIL1Q9UBC1 381 aaPredicted RBP30.48■■■□□ 2.47
CMTM4-204ENST00000563952 DNAJC6O75061 913 aa30.47■■■□□ 2.47
CMTM4-204ENST00000563952 SLC25A14O95258 325 aaPredicted RBP30.47■■■□□ 2.47
CMTM4-204ENST00000563952 AGTP01019 485 aa30.47■■■□□ 2.47
CMTM4-204ENST00000563952 CCL7P80098 99 aa30.47■■■□□ 2.47
CMTM4-204ENST00000563952 PRPSAP1Q14558 356 aa30.47■■■□□ 2.47
CMTM4-204ENST00000563952 ZNF648Q5T619 568 aaPredicted RBP30.47■■■□□ 2.47
CMTM4-204ENST00000563952 SPATA13Q96N96 652 aa30.47■■■□□ 2.47
CMTM4-204ENST00000563952 TRABDQ9H4I3 376 aa30.47■■■□□ 2.47
CMTM4-204ENST00000563952 PCYT1BQ9Y5K3 369 aaPredicted RBP30.47■■■□□ 2.47
CMTM4-204ENST00000563952 FREM2Q5SZK8 3169 aa30.47■■■□□ 2.47
CMTM4-204ENST00000563952 ECEL1O95672 775 aa30.46■■■□□ 2.47
CMTM4-204ENST00000563952 MPOP05164 745 aa30.46■■■□□ 2.47
CMTM4-204ENST00000563952 PEX6Q13608 980 aa30.46■■■□□ 2.47
CMTM4-204ENST00000563952 GLT6D1Q7Z4J2 308 aa30.46■■■□□ 2.47
CMTM4-204ENST00000563952 CCNJLQ8IV13 435 aa30.46■■■□□ 2.47
CMTM4-204ENST00000563952 LRRC8AQ8IWT6 810 aa30.46■■■□□ 2.47
CMTM4-204ENST00000563952 TTC30BQ8N4P2 665 aa30.46■■■□□ 2.47
CMTM4-204ENST00000563952 ATXN7L3BQ96GX2 97 aa30.46■■■□□ 2.47
CMTM4-204ENST00000563952 GFM1Q96RP9 751 aaKnown RBP30.46■■■□□ 2.47
CMTM4-204ENST00000563952 HACD3Q9P035 362 aa30.46■■■□□ 2.47
CMTM4-204ENST00000563952 R3HDM2Q9Y2K5 976 aaKnown RBP30.46■■■□□ 2.47
CMTM4-204ENST00000563952 TCRBV7S2A1N4TA0A589 114 aa30.45■■■□□ 2.47
CMTM4-204ENST00000563952 NTN3O00634 580 aaPredicted RBP30.45■■■□□ 2.47
CMTM4-204ENST00000563952 BRINP1O60477 761 aa30.45■■■□□ 2.47
CMTM4-204ENST00000563952 HMGCLP35914 325 aa30.45■■■□□ 2.47
CMTM4-204ENST00000563952 KLF1Q13351 362 aaPredicted RBP30.45■■■□□ 2.47
CMTM4-204ENST00000563952 LRP8Q14114 963 aa30.45■■■□□ 2.47
CMTM4-204ENST00000563952 CHST15Q7LFX5 561 aaPredicted RBP30.45■■■□□ 2.47
CMTM4-204ENST00000563952 PATE1Q8WXA2 126 aa30.45■■■□□ 2.47
CMTM4-204ENST00000563952 GLYATL1Q969I3 302 aa30.45■■■□□ 2.47
CMTM4-204ENST00000563952 APOL2Q9BQE5 337 aa30.45■■■□□ 2.47
CMTM4-204ENST00000563952 OR2AG1Q9H205 316 aa30.45■■■□□ 2.47
CMTM4-204ENST00000563952 LRRN3Q9H3W5 708 aa30.45■■■□□ 2.47
CMTM4-204ENST00000563952 LZTFL1Q9NQ48 299 aa30.45■■■□□ 2.47
CMTM4-204ENST00000563952 ATXN10Q9UBB4 475 aa30.45■■■□□ 2.47
CMTM4-204ENST00000563952 APPL1Q9UKG1 709 aa30.45■■■□□ 2.47
CMTM4-204ENST00000563952 AAR2Q9Y312 384 aaKnown RBP30.45■■■□□ 2.47
CMTM4-204ENST00000563952 ENTPD2Q9Y5L3 495 aa30.45■■■□□ 2.47
CMTM4-204ENST00000563952 NUDT21O43809 227 aaKnown RBP30.44■■■□□ 2.46
CMTM4-204ENST00000563952 ZNF189O75820 626 aaPredicted RBP30.44■■■□□ 2.46
CMTM4-204ENST00000563952 CCDC175P0C221 793 aa30.44■■■□□ 2.46
CMTM4-204ENST00000563952 GABREP78334 506 aa30.44■■■□□ 2.46
CMTM4-204ENST00000563952 BIRC2Q13490 618 aa30.44■■■□□ 2.46
CMTM4-204ENST00000563952 SEL1L2Q5TEA6 688 aa30.44■■■□□ 2.46
CMTM4-204ENST00000563952 PDPK2PQ6A1A2 396 aa30.44■■■□□ 2.46
CMTM4-204ENST00000563952 FAM71DQ8N9W8 422 aa30.44■■■□□ 2.46
CMTM4-204ENST00000563952 PLEKHG4BQ96PX9 1271 aa30.44■■■□□ 2.46
CMTM4-204ENST00000563952 RMI1Q9H9A7 625 aa30.44■■■□□ 2.46
CMTM4-204ENST00000563952 ZFC3H1O60293 1989 aaKnown RBP30.44■■■□□ 2.46
CMTM4-204ENST00000563952 DMXL2Q8TDJ6 3036 aa30.43■■■□□ 2.46
CMTM4-204ENST00000563952 A0A1W2PQM1 296 aa30.43■■■□□ 2.46
CMTM4-204ENST00000563952 RHPN2P1A8MT19 583 aa30.43■■■□□ 2.46
CMTM4-204ENST00000563952 BUD23O43709 281 aaKnown RBP30.43■■■□□ 2.46
CMTM4-204ENST00000563952 ACP5P13686 325 aa30.43■■■□□ 2.46
CMTM4-204ENST00000563952 PNLIPP16233 465 aa30.43■■■□□ 2.46
CMTM4-204ENST00000563952 ZNF8P17098 575 aaPredicted RBP30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms