RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 TOMM70O94826 608 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 HAUS5O94927 633 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 AK1P00568 194 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 ABHD2P08910 425 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 CCDC192P0DO97 292 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 MMP9P14780 707 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 GLRA2P23416 452 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 PON1P27169 355 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 SFNP31947 248 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 GCLCP48506 637 aaPredicted RBP5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 ETV1P50549 477 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 UCP2P55851 309 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 FOXL2P58012 376 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 UBE2HP62256 183 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 GOLGA8FQ08AF8 430 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 MZT1Q08AG7 82 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 GRSF1Q12849 480 aaKnown RBP eCLIP5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 TCF15Q12870 199 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 GPM6BQ13491 265 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 AP5B1Q2VPB7 878 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 FBXO43Q4G163 708 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 AARDQ4LEZ3 155 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 XKR9Q5GH70 373 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 CLEC2AQ6UVW9 174 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 C16orf89Q6UX73 402 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 LRIG3Q6UXM1 1119 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 CFAP77Q6ZQR2 320 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 TRAPPC11Q7Z392 1133 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 SPATA21Q7Z572 469 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 PRRT2Q7Z6L0 340 aaPredicted RBP5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 AMZ2Q86W34 360 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 APOBEC3FQ8IUX4 373 aaKnown RBP5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 SPARTQ8N0X7 666 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 LILRA2Q8N149 483 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 NETO2Q8NC67 525 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 LRRC8CQ8TDW0 803 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 FAM81BQ96LP2 452 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 RMDN2Q96LZ7 410 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 HAPLN3Q96S86 360 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 CDK5RAP1Q96SZ6 601 aaKnown RBP5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 CDRT15Q96T59 188 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 PKP2Q99959 881 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 DPYSL5Q9BPU6 564 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 XYLT2Q9H1B5 865 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 WNT5BQ9H1J7 359 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 PRDM7Q9NQW5 492 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 SMPD3Q9NY59 655 aaPredicted RBP5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 GABRQQ9UN88 632 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 BCORQ6W2J9 1755 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 A0A1B0GVM2 712 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 A0A1W2PR77 199 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 CDHR4A6H8M9 788 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 ANGPT2O15123 496 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 TRIM24O15164 1050 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 USP12O75317 370 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 IPO7O95373 1038 aaKnown RBP5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 OR52Z1P0C646 297 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 ADRA2CP18825 462 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 ITIH1P19827 911 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 CD9P21926 228 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 TCEA1P23193 301 aaKnown RBP5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 RBL1P28749 1068 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 CCR1P32246 355 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 MTNR1AP48039 350 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 PCP4P48539 62 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 CLCNKAP51800 687 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 RAC3P60763 192 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 FKBP1BP68106 108 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 CYP4F8P98187 520 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 DUSP2Q05923 314 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 IL24Q13007 206 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 PLD1Q13393 1074 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 GAMTQ14353 236 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 SLC39A14Q15043 492 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 KCNMB1Q16558 191 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 CCDC142Q17RM4 750 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 TAF1BQ53T94 588 aaPredicted RBP5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 FAM47AQ5JRC9 791 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 DNTTIP2Q5QJE6 756 aaKnown RBP5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 C1orf185Q5T7R7 199 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 KRT79Q5XKE5 535 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 VASNQ6EMK4 673 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 CCDC144NLQ6NUI1 221 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 AFTPHQ6ULP2 937 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 SLC30A10Q6XR72 485 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 SLC36A4Q6YBV0 504 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 OTOP2Q7RTS6 562 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 ZSWIM9Q86XI8 627 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 SERPINA12Q8IW75 414 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 DDIASQ8IXT1 998 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 CLYBLQ8N0X4 340 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 KDM8Q8N371 416 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 HJURPQ8NCD3 748 aaPredicted RBP5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 CFAP61Q8NHU2 1237 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 LIN37Q96GY3 246 aaPredicted RBP5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 CAMK1GQ96NX5 476 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 EIF3CQ99613 913 aaKnown RBP5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 SLC39A3Q9BRY0 314 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 C17orf80Q9BSJ5 609 aa5.23□□□□□ -1.57
VPS35P1-201ENST00000563400 SCNM1Q9BWG6 230 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms