RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 BAG2O95816 211 aa21.21■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 IGSF6O95976 241 aa21.21■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 MT-CO1P00395 513 aa21.21■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 CYBBP04839 570 aa21.21■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 CLNS1AP54105 237 aaKnown RBP21.21■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 XIAPP98170 497 aa21.21■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 CTSL3PQ5NE16 218 aa21.21■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 ANKS6Q68DC2 871 aa21.21■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 LILRA6Q6PI73 481 aa21.21■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 BBS7Q8IWZ6 715 aa21.21■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 HS6ST3Q8IZP7 471 aa21.21■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 FIBCD1Q8N539 461 aa21.21■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 TTC16Q8NEE8 873 aa21.21■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 SLC26A7Q8TE54 656 aa21.21■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 WDR41Q9HAD4 459 aa21.21■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 TRIM43BA6NCK2 446 aa21.2■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 AZIN1O14977 448 aa21.2■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 CLASP2O75122 1294 aaKnown RBP21.2■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 CDK14O94921 469 aa21.2■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 ITGB8P26012 769 aa21.2■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 IRX1P78414 480 aaPredicted RBP21.2■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 LCP2Q13094 533 aa21.2■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 FASTKQ14296 549 aaKnown RBP21.2■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 TSNQ15631 228 aaKnown RBP21.2■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 CLEC6AQ6EIG7 209 aa21.2■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 LYSMD3Q7Z3D4 306 aa21.2■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 BHMTQ93088 406 aa21.2■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 TRIM43Q96BQ3 446 aaPredicted RBP21.2■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 C1QTNF3Q9BXJ4 246 aa21.2■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 TM6SF2Q9BZW4 377 aa21.2■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 ATP13A3Q9H7F0 1226 aa21.2■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 ABCB8Q9NUT2 735 aa21.2■□□□□ 0.99
VPS9D1-AS1-202ENST00000562866 K7ERQ8 282 aa21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 BTN3A1O00481 513 aa21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 HTRA2O43464 458 aaPredicted RBP21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 KLK8O60259 260 aa21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 OR1I1O60431 355 aa21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 SIX3O95343 332 aaPredicted RBP21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 CXCL14O95715 111 aa21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 C8AP07357 584 aa21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 ACRP10323 421 aa21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 CTPS1P17812 591 aa21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 TSPAN8P19075 237 aa21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 CHRM3P20309 590 aa21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 EEF1DP29692 281 aaKnown RBP21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 CDH13P55290 713 aa21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 STX1BP61266 288 aa21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 SH3BP2P78314 561 aa21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 LMAN2Q12907 356 aa21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 UGT3A2Q3SY77 523 aa21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 TCHHL1Q5QJ38 904 aaPredicted RBP21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 KANK2Q63ZY3 851 aa21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 LARP4Q71RC2 724 aaKnown RBP eCLIP21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 EFL1Q7Z2Z2 1120 aaKnown RBP21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 CAMK1DQ8IU85 385 aa21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 PAF1Q8N7H5 531 aa21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 FUBP1Q96AE4 644 aaKnown RBP21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 CDRT15Q96T59 188 aa21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 LBHD1Q9BQE6 289 aaPredicted RBP21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 MRPL40Q9NQ50 206 aaKnown RBP21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 EVLQ9UI08 416 aaPredicted RBP21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 PPM1HQ9ULR3 514 aa21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 FNDC3AQ9Y2H6 1198 aaKnown RBP21.2■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 NPEPPSL1A6NEC2 478 aa21.19■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 NIPSNAP2O75323 286 aa21.19■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 VPS4BO75351 444 aa21.19■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 RPS17P08708 135 aaKnown RBP21.19■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 ENO3P13929 434 aaPredicted RBP21.19■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 CLCQ05315 142 aa21.19■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 CDC16Q13042 620 aa21.19■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 PTK2BQ14289 1009 aa21.19■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 GEN1Q17RS7 908 aa21.19■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 LYPLAL1Q5VWZ2 237 aa21.19■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 SIDT2Q8NBJ9 832 aaKnown RBP21.19■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 KREMEN2Q8NCW0 462 aa21.19■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 SHKBP1Q8TBC3 707 aa21.19■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 CD200R1Q8TD46 325 aa21.19■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 LINGO1Q96FE5 620 aa21.19■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 EMILIN2Q9BXX0 1053 aa21.19■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 P2RY12Q9H244 342 aa21.19■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 VCX3BQ9H321 246 aa21.19■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 ZFYVE1Q9HBF4 777 aa21.19■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 ASAH2Q9NR71 780 aa21.19■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 LEFTY2O00292 366 aa21.18■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 CDC7O00311 574 aa21.18■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 PRMT5O14744 637 aaPredicted RBP21.18■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 SNX2O60749 519 aa21.18■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 GJA8P48165 433 aa21.18■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 PLEKHG6Q3KR16 790 aa21.18■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 PIGGQ5H8A4 983 aa21.18■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 TRIM68Q6AZZ1 485 aa21.18■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 TRPC4APQ8TEL6 797 aa21.18■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 PAWRQ96IZ0 340 aaKnown RBP21.18■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 SLC25A23Q9BV35 468 aa21.18■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 APPL1Q9UKG1 709 aa21.18■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 BRCA2P51587 3418 aa21.18■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 A0A0J9YYE9 177 aa21.18■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 A0A1W2PRU2 124 aa21.18■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 SMAD6O43541 496 aaKnown RBP21.18■□□□□ 0.98
VPS9D1-AS1-202ENST00000562866 CRCPO75575 148 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 567.8 ms