RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 FAM69BQ5VUD6 431 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 CPZQ66K79 652 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 ZNF787Q6DD87 383 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 TXNRD3NBQ6F5E7 133 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 ACAD10Q6JQN1 1059 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 CRTC3Q6UUV7 619 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 OR6C1Q96RD1 312 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 NUDCD1Q96RS6 583 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 BRD8Q9H0E9 1235 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 FANCLQ9NW38 375 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 DTLQ9NZJ0 730 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 OGFRQ9NZT2 677 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 SCHIP1Q9P0W5 487 aaPredicted RBP11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 MAP10Q9P2G4 905 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 LNPEPQ9UIQ6 1025 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 KCND3Q9UK17 655 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 TLK1Q9UKI8 766 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 CHKBQ9Y259 395 aa11.58□□□□□ -0.56
NSMCE1-202ENST00000561960 MDC1Q14676 2089 aaKnown RBP11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 TTLL8A6PVC2 850 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 FADS2P1A8MWK0 482 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 PRPSAP2O60256 369 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 DNAJC6O75061 913 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 TIAF1O95411 115 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 GJC1P36383 396 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 MMP13P45452 471 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 RENBPP51606 427 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 COPB1P53618 953 aaKnown RBP11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 PPP1CAP62136 330 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 ABHD18Q0P651 414 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 MMRN1Q13201 1228 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 KCNAB1Q14722 419 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 NADK2Q4G0N4 442 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 ARMC12Q5T9G4 340 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 CDKAL1Q5VV42 579 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 ALS2CLQ60I27 953 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 FAM199XQ6PEV8 388 aaPredicted RBP11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 ADAMTSL4Q6UY14 1074 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 FAM92BQ6ZTR7 304 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 USP45Q70EL2 814 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 ATCAYQ86WG3 371 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 RASGRP3Q8IV61 690 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 CBARPQ8N350 705 aaPredicted RBP11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 ATPAF2Q8N5M1 289 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 PIH1D2Q8WWB5 315 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 BTBD6Q96KE9 485 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 B3GNT4Q9C0J1 378 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 TWSG1Q9GZX9 223 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 AKIRIN1Q9H9L7 192 aaPredicted RBP11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 CNOT8Q9UFF9 292 aaKnown RBP11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 PHTF1Q9UMS5 762 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 DNAJC16Q9Y2G8 782 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 SLC30A1Q9Y6M5 507 aa11.57□□□□□ -0.56
NSMCE1-202ENST00000561960 PIPSLA2A3N6 862 aa11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 MAFKO60675 156 aa11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 SOCS5O75159 536 aa11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 LRCH4O75427 683 aa11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 RASSF9O75901 435 aa11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 FASLGP48023 281 aa11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 EPHB1P54762 984 aa11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 UBXN1Q04323 297 aa11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 MRPL49Q13405 166 aaKnown RBP11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 RFTN1Q14699 578 aaPredicted RBP11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 WDR74Q6RFH5 385 aaPredicted RBP11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 C6orf15Q6UXA7 325 aaPredicted RBP11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 CERS6Q6ZMG9 384 aa11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 CPNE8Q86YQ8 564 aa11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 LPCAT1Q8NF37 534 aa11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 STAMBPL1Q96FJ0 436 aa11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 SCRN2Q96FV2 425 aa11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 TEFMQ96QE5 360 aaKnown RBP11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 WDR24Q96S15 920 aa11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 MGME1Q9BQP7 344 aa11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 MFRPQ9BY79 579 aa11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 NUP62CLQ9H1M0 184 aa11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 SIDT1Q9NXL6 827 aaKnown RBP11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 CNOT6Q9ULM6 557 aaKnown RBP11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 TMEM184BQ9Y519 407 aaPredicted RBP11.56□□□□□ -0.56
NSMCE1-202ENST00000561960 PCSK5Q92824 1860 aa11.55□□□□□ -0.56
NSMCE1-202ENST00000561960 MKRN2OSH3BPM6 223 aa11.55□□□□□ -0.56
NSMCE1-202ENST00000561960 MTX2O75431 263 aa11.55□□□□□ -0.56
NSMCE1-202ENST00000561960 NDUFA10O95299 355 aa11.55□□□□□ -0.56
NSMCE1-202ENST00000561960 CD48P09326 243 aa11.55□□□□□ -0.56
NSMCE1-202ENST00000561960 PIRTP0C851 137 aa11.55□□□□□ -0.56
NSMCE1-202ENST00000561960 CASP14P31944 242 aa11.55□□□□□ -0.56
NSMCE1-202ENST00000561960 AIF1P55008 147 aa11.55□□□□□ -0.56
NSMCE1-202ENST00000561960 SQSTM1Q13501 440 aa11.55□□□□□ -0.56
NSMCE1-202ENST00000561960 CLPPQ16740 277 aaPredicted RBP11.55□□□□□ -0.56
NSMCE1-202ENST00000561960 TDRD12Q587J7 1177 aaKnown RBP11.55□□□□□ -0.56
NSMCE1-202ENST00000561960 CAPRIN2Q6IMN6 1127 aaKnown RBP11.55□□□□□ -0.56
NSMCE1-202ENST00000561960 IYDQ6PHW0 289 aa11.55□□□□□ -0.56
NSMCE1-202ENST00000561960 TMCO3Q6UWJ1 677 aa11.55□□□□□ -0.56
NSMCE1-202ENST00000561960 CCDC13Q8IYE1 715 aa11.55□□□□□ -0.56
NSMCE1-202ENST00000561960 CT55Q8WUE5 264 aa11.55□□□□□ -0.56
NSMCE1-202ENST00000561960 RSC1A1Q92681 617 aa11.55□□□□□ -0.56
NSMCE1-202ENST00000561960 SCARF2Q96GP6 870 aaPredicted RBP11.55□□□□□ -0.56
NSMCE1-202ENST00000561960 COX14Q96I36 57 aa11.55□□□□□ -0.56
NSMCE1-202ENST00000561960 CSPG4P5Q96PW8 444 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms