RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 GLI1P08151 1106 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 CD8BP10966 210 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 FCGR2AP12318 317 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 CSF2RAP15509 400 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ITGB5P18084 799 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 VCLP18206 1134 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ADRA2CP18825 462 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 GNAZP19086 355 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 FSTP19883 344 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 TGM2P21980 687 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 HNRNPA2B1P22626 353 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 CALB2P22676 271 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 SFPQP23246 707 aaKnown RBP eCLIP2.04□□□□□ -2.08
RTF1-207ENST00000561076 GCSHP23434 173 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ITGB8P26012 769 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 YWHAQP27348 245 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 CHRNA5P30532 468 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 GKP32189 559 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 CCT6AP40227 531 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 MC3RP41968 323 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 FRKP42685 505 aaPredicted RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 PTPN9P43378 593 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 AGTR2P50052 363 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 SERPINH1P50454 418 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 PEX5P50542 639 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 CLCN3P51790 818 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 SMSP52788 366 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ARSFP54793 590 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 CDH13P55290 713 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 SLC37A1P57057 533 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 FOXL2P58012 376 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 RAC3P60763 192 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 TRA2BP62995 288 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 SIRPAP78324 504 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 CCNA1P78396 465 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 MRPS34P82930 218 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 SRSF3P84103 164 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 SHC2P98077 582 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 BEX3Q00994 111 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 HHEXQ03014 270 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 LCP2Q13094 533 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 GPM6BQ13491 265 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 NAE1Q13564 534 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 DYRK1AQ13627 763 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 RIN1Q13671 783 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 DDX39BQ13838 428 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 GALNT3Q14435 633 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ARHGEF6Q15052 776 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 PGM5Q15124 567 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 PRKD1Q15139 912 aaPredicted RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 DLG2Q15700 870 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 CDO1Q16878 200 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 KRT24Q2M2I5 525 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 USP41Q3LFD5 358 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ANXA2RQ3ZCQ2 193 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 FBXO43Q4G163 708 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 IQCCQ4KMZ1 466 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 PLEKHO1Q53GL0 409 aaPredicted RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 CAVIN4Q5BKX8 364 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 SGO1Q5FBB7 561 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 HERC4Q5GLZ8 1057 aaPredicted RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 ARL13AQ5H913 290 aaPredicted RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 C6orf141Q5SZD1 244 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 TMEM63BQ5T3F8 832 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 SLFN13Q68D06 897 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 TXNDC8Q6A555 127 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 NAPEPLDQ6IQ20 393 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 GRHL2Q6ISB3 625 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ARHGAP11AQ6P4F7 1023 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 FIP1L1Q6UN15 594 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 AATKQ6ZMQ8 1374 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 WDR88Q6ZMY6 472 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 CFAP77Q6ZQR2 320 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 TRILQ7L0X0 811 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ARMCX2Q7L311 632 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 LDB1Q86U70 411 aaPredicted RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 TLK2Q86UE8 772 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 CCDC190Q86UF4 302 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 FAM124AQ86V42 546 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ALYREFQ86V81 257 aaKnown RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 IGFN1Q86VF2 1251 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ZNF410Q86VK4 478 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ZNF573Q86YE8 665 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 DENND6AQ8IWF6 608 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 UEVLDQ8IX04 471 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ELMOD2Q8IZ81 293 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ADGRG5Q8IZF4 528 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 BBS5Q8N3I7 341 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 RASGEF1CQ8N431 466 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ZNF611Q8N823 705 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 PNPLA1Q8N8W4 532 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 HJURPQ8NCD3 748 aaPredicted RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 BEND2Q8NDZ0 799 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 SETD9Q8NE22 299 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 ZNF397Q8NF99 534 aaPredicted RBP2.04□□□□□ -2.08
RTF1-207ENST00000561076 NUDT10Q8NFP7 164 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 OR10S1Q8NGN2 331 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 OR10T2Q8NGX3 314 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 OR14L1PQ8NHC6 308 aa2.04□□□□□ -2.08
RTF1-207ENST00000561076 EXD1Q8NHP7 514 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms