RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-208ENST00000561059 PCDH9Q9HC56 1237 aa13.29□□□□□ -0.28
PSME1-208ENST00000561059 STARD5Q9NSY2 213 aa13.29□□□□□ -0.28
PSME1-208ENST00000561059 SDK2Q58EX2 2172 aa13.29□□□□□ -0.28
PSME1-208ENST00000561059 C1orf232A0A0U1RR37 186 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 SYCE3A1L190 88 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 KCNK1O00180 336 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 DNAJC6O75061 913 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 JCHAINP01591 159 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 PIRTP0C851 137 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 CD82P27701 267 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 PBX1P40424 430 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 CD86P42081 329 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 PAFAH1B3Q15102 231 aaKnown RBP13.28□□□□□ -0.28
PSME1-208ENST00000561059 QPCTQ16769 361 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 HADHQ16836 314 aaKnown RBP13.28□□□□□ -0.28
PSME1-208ENST00000561059 FIGNQ5HY92 759 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 ZFYVE27Q5T4F4 411 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 ALS2CLQ60I27 953 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 TMEM71Q6P5X7 295 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 PTRH1Q86Y79 214 aaKnown RBP13.28□□□□□ -0.28
PSME1-208ENST00000561059 UNC5BQ8IZJ1 945 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 CACNA2D3Q8IZS8 1091 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 NDUFAF2Q8N183 169 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 SFRP1Q8N474 314 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 FAM71BQ8TC56 605 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 NCSTNQ92542 709 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 TBC1D10AQ9BXI6 508 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 SLC12A9Q9BXP2 914 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 APMAPQ9HDC9 416 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 DTLQ9NZJ0 730 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 CTTNBP2NLQ9P2B4 639 aa13.28□□□□□ -0.28
PSME1-208ENST00000561059 RCOR3Q9P2K3 495 aaPredicted RBP13.28□□□□□ -0.28
PSME1-208ENST00000561059 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.27□□□□□ -0.29
PSME1-208ENST00000561059 ZW10O43264 779 aa13.27□□□□□ -0.29
PSME1-208ENST00000561059 RAD1O60671 282 aa13.27□□□□□ -0.29
PSME1-208ENST00000561059 MMP2P08253 660 aa13.27□□□□□ -0.29
PSME1-208ENST00000561059 PRKAR1AP10644 381 aa13.27□□□□□ -0.29
PSME1-208ENST00000561059 ZNF30P17039 623 aa13.27□□□□□ -0.29
PSME1-208ENST00000561059 SPINT3P49223 89 aa13.27□□□□□ -0.29
PSME1-208ENST00000561059 ATP1A2P50993 1020 aa13.27□□□□□ -0.29
PSME1-208ENST00000561059 UBASH3AP57075 661 aa13.27□□□□□ -0.29
PSME1-208ENST00000561059 HHEXQ03014 270 aa13.27□□□□□ -0.29
PSME1-208ENST00000561059 ZBTB17Q13105 803 aa13.27□□□□□ -0.29
PSME1-208ENST00000561059 TRA2AQ13595 282 aaKnown RBP eCLIP13.27□□□□□ -0.296e-7■■■■□ 19.8
PSME1-208ENST00000561059 IFI16Q16666 785 aaKnown RBP13.27□□□□□ -0.29
PSME1-208ENST00000561059 PLA2G4EQ3MJ16 856 aa13.27□□□□□ -0.29
PSME1-208ENST00000561059 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.27□□□□□ -0.29
PSME1-208ENST00000561059 ALG1LQ6GMV1 187 aa13.27□□□□□ -0.29
PSME1-208ENST00000561059 TIGD7Q6NT04 549 aaPredicted RBP13.27□□□□□ -0.29
PSME1-208ENST00000561059 ZNF765Q7L2R6 523 aa13.27□□□□□ -0.29
PSME1-208ENST00000561059 LYSMD3Q7Z3D4 306 aa13.27□□□□□ -0.29
PSME1-208ENST00000561059 OR10G6Q8NH81 332 aa13.27□□□□□ -0.29
PSME1-208ENST00000561059 RAPGEF5Q92565 580 aa13.27□□□□□ -0.29
PSME1-208ENST00000561059 FAM83DQ9H4H8 585 aa13.27□□□□□ -0.29
PSME1-208ENST00000561059 PRDM8Q9NQV8 689 aa13.27□□□□□ -0.29
PSME1-208ENST00000561059 PCDHGA3Q9Y5H0 932 aa13.27□□□□□ -0.29
PSME1-208ENST00000561059 BZW2Q9Y6E2 419 aaKnown RBP13.27□□□□□ -0.29
PSME1-208ENST00000561059 A0A1W2PQJ5 194 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 NKX2-8O15522 239 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 DUX1O43812 170 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 PROSCO94903 275 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 GYPCP04921 128 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 CCNCP24863 283 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 FASLGP48023 281 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 GPLD1P80108 840 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 ZBED6P86452 979 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 CLPPQ16740 277 aaPredicted RBP13.26□□□□□ -0.29
PSME1-208ENST00000561059 COLEC12Q5KU26 742 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 DCAF12Q5T6F0 453 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 HENMT1Q5T8I9 393 aaKnown RBP13.26□□□□□ -0.29
PSME1-208ENST00000561059 CRTC3Q6UUV7 619 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 NPNTQ6UXI9 565 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 TIPARPQ7Z3E1 657 aaKnown RBP13.26□□□□□ -0.29
PSME1-208ENST00000561059 LRRC49Q8IUZ0 686 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 CCDC13Q8IYE1 715 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 CNTD1Q8N815 330 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 BMPERQ8N8U9 685 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 CCDC112Q8NEF3 446 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 SYN2Q92777 582 aaPredicted RBP13.26□□□□□ -0.29
PSME1-208ENST00000561059 EID2BQ96D98 161 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 TSGA13Q96PP4 275 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 ZNF670Q9BS34 389 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 MLPHQ9BV36 600 aaPredicted RBP13.26□□□□□ -0.29
PSME1-208ENST00000561059 OR2AG1Q9H205 316 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 OSGEPL1Q9H4B0 414 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 ATXN10Q9UBB4 475 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 IL17BQ9UHF5 180 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 CAPN11Q9UMQ6 739 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 SHOC2Q9UQ13 582 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 HEY1Q9Y5J3 304 aa13.26□□□□□ -0.29
PSME1-208ENST00000561059 LOC101059948A0A1B0GTJ6 334 aa13.25□□□□□ -0.29
PSME1-208ENST00000561059 TERTO14746 1132 aaKnown RBP13.25□□□□□ -0.29
PSME1-208ENST00000561059 SUV39H1O43463 412 aa13.25□□□□□ -0.29
PSME1-208ENST00000561059 MTX2O75431 263 aa13.25□□□□□ -0.29
PSME1-208ENST00000561059 ZNF8P17098 575 aaPredicted RBP13.25□□□□□ -0.29
PSME1-208ENST00000561059 TYRP1P17643 537 aa13.25□□□□□ -0.29
PSME1-208ENST00000561059 CASP14P31944 242 aa13.25□□□□□ -0.29
PSME1-208ENST00000561059 GFERP55789 205 aa13.25□□□□□ -0.29
PSME1-208ENST00000561059 SQSTM1Q13501 440 aa13.25□□□□□ -0.29
PSME1-208ENST00000561059 PEX6Q13608 980 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms