RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 ARL4DP49703 201 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 ACY1Q03154 408 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 BCL2L1Q07817 233 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 CUL4AQ13619 759 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 ATP1A4Q13733 1029 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 MYBPC3Q14896 1274 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 SLC25A52Q3SY17 297 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 PYCR3Q53H96 274 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 CRB2Q5IJ48 1285 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 IZUMO3Q5VZ72 239 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 RESP18Q5W5W9 173 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 PWWP2BQ6NUJ5 590 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 IYDQ6PHW0 289 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 FAM180AQ6UWF9 173 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 Q6ZS92 163 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 PRSS42Q7Z5A4 293 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 PHLDB2Q86SQ0 1253 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 BPHLQ86WA6 291 aaPredicted RBP9.43□□□□□ -0.9
HERC1-210ENST00000560897 ZSWIM9Q86XI8 627 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 TMEM126BQ8IUX1 230 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 TRIM48Q8IWZ4 208 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 CBARPQ8N350 705 aaPredicted RBP9.43□□□□□ -0.9
HERC1-210ENST00000560897 C1orf131Q8NDD1 294 aaKnown RBP9.43□□□□□ -0.9
HERC1-210ENST00000560897 COG1Q8WTW3 980 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 FAR1Q8WVX9 515 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 INPP5DQ92835 1189 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 RELTQ969Z4 430 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 SLC35C1Q96A29 364 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 TBC1D31Q96DN5 1066 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 ZDHHC12Q96GR4 267 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 FER1L6-AS2Q96M78 137 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 WDR77Q9BQA1 342 aaPredicted RBP9.43□□□□□ -0.9
HERC1-210ENST00000560897 AKIRIN1Q9H9L7 192 aaPredicted RBP9.43□□□□□ -0.9
HERC1-210ENST00000560897 MCCC2Q9HCC0 563 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 CPNE7Q9UBL6 633 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 LHX3Q9UBR4 397 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 OR12D3Q9UGF7 316 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 TMEM98Q9Y2Y6 226 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 NEU2Q9Y3R4 380 aa9.43□□□□□ -0.9
HERC1-210ENST00000560897 TRGV8A0A0C4DH27 118 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 A0A1W2PQJ5 194 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 FAM221AA4D161 298 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 BHMG1C9JSJ3 638 aaPredicted RBP9.42□□□□□ -0.9
HERC1-210ENST00000560897 FANCGO15287 622 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 SCRG1O75711 98 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 ASMTLO95671 621 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 EML2O95834 649 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 VIPP01282 170 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 IGHEP01854 428 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 ERBB2P04626 1255 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 F3P13726 295 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 GM2AP17900 193 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 NELFEP18615 380 aaKnown RBP9.42□□□□□ -0.9
HERC1-210ENST00000560897 FECHP22830 423 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 TEAD1P28347 426 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 USP8P40818 1118 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 MARSP56192 900 aaKnown RBP9.42□□□□□ -0.9
HERC1-210ENST00000560897 GSDMDP57764 484 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 CDC16Q13042 620 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 LAMB3Q13751 1172 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 ASIC2Q16515 512 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 ANO6Q4KMQ2 910 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 FAM102AQ5T9C2 384 aaPredicted RBP9.42□□□□□ -0.9
HERC1-210ENST00000560897 FCRL6Q6DN72 434 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 IRGCQ6NXR0 463 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 FAM92BQ6ZTR7 304 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 NLRP14Q86W24 1093 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 ARHGEF19Q8IW93 802 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 GALNT16Q8N428 558 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 DTD2Q96FN9 168 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 SCARF2Q96GP6 870 aaPredicted RBP9.42□□□□□ -0.9
HERC1-210ENST00000560897 CCDC120Q96HB5 630 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 COQ10AQ96MF6 247 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 AGAP3Q96P47 875 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 IP6K3Q96PC2 410 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 CHST8Q9H2A9 424 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 OLAHQ9NV23 265 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 B4GALT6Q9UBX8 382 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 AJAP1Q9UKB5 411 aaPredicted RBP9.42□□□□□ -0.9
HERC1-210ENST00000560897 TCFL5Q9UL49 500 aa9.42□□□□□ -0.9
HERC1-210ENST00000560897 NOVA2Q9UNW9 492 aaKnown RBP9.42□□□□□ -0.9
HERC1-210ENST00000560897 CNTRLQ7Z7A1 2325 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 CCL21O00585 134 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 PEX12O00623 359 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 JRKO75564 520 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 PYGLP06737 847 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 RAB40ALP0C0E4 278 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 CYP2A6P11509 494 aaPredicted RBP9.41□□□□□ -0.9
HERC1-210ENST00000560897 ETV3P41162 512 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 CAPZBP47756 277 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 FKBP3Q00688 224 aaKnown RBP9.41□□□□□ -0.9
HERC1-210ENST00000560897 SRSF11Q05519 484 aaKnown RBP9.41□□□□□ -0.9
HERC1-210ENST00000560897 PAK1Q13153 545 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 CNGA3Q16281 694 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 XKRXQ6PP77 449 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 TMEM26Q6ZUK4 368 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 ZNF765Q7L2R6 523 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 CHST15Q7LFX5 561 aaPredicted RBP9.41□□□□□ -0.9
HERC1-210ENST00000560897 SRLQ86TD4 932 aa9.41□□□□□ -0.9
HERC1-210ENST00000560897 PHYKPLQ8IUZ5 450 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms