RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 HACD3Q9P035 362 aa6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 ARPP21Q9UBL0 812 aaPredicted RBP6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 ZNF70Q9UC06 446 aaPredicted RBP6.74□□□□□ -1.33
TSPAN3-209ENST00000560715 NCANO14594 1321 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 WASH4PA8MWX3 477 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 GOLGA8MH3BSY2 632 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 PYCARD-AS1I3L0S3 204 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 GPR25O00155 361 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 PSMD12O00232 456 aaPredicted RBP6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 WNT10BO00744 389 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 HNRNPDLO14979 420 aaKnown RBP6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 B4GALT4O60513 344 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 FOXD2O60548 495 aaPredicted RBP6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 QDPRP09417 244 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 CHRNB2P17787 502 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 SLC6A9P48067 706 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 DYNLL1P63167 89 aaKnown RBP6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 PDK1Q15118 436 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 EPHA7Q15375 998 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 NHSL2Q5HYW2 709 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 CATSPERGQ6ZRH7 1159 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 SLC51BQ86UW2 128 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 FAM160B2Q86V87 743 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 TDRPQ86YL5 185 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 CLVS1Q8IUQ0 354 aaPredicted RBP6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 ZDHHC14Q8IZN3 488 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 NATD1Q8N6N6 113 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 ANGPTL6Q8NI99 470 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 FIBINQ8TAL6 211 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 CYP2W1Q8TAV3 490 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 ISOC1Q96CN7 298 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 ERLEC1Q96DZ1 483 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 TMA16Q96EY4 203 aaKnown RBP6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 ATP6V0BQ99437 205 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 HERC2P3Q9BVR0 1158 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 SLC2A11Q9BYW1 496 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 MOV10Q9HCE1 1003 aaKnown RBP6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 UCKL1Q9NWZ5 548 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 TFCP2L1Q9NZI6 479 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 EBF1Q9UH73 591 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 AURKCQ9UQB9 309 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 SF3B6Q9Y3B4 125 aaKnown RBP6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 PCDHGC4Q9Y5F7 938 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 H7C4K7 107 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 HAT1O14929 419 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 SLCO2B1O94956 709 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 ABHD2P08910 425 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 GSTM1P09488 218 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 SLC1A1P43005 524 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 HSPA13P48723 471 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 BMXP51813 675 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 HTD2P86397 168 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 CAV1Q03135 178 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 KCNAB2Q13303 367 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 LSM12Q3MHD2 195 aaKnown RBP6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 CRY2Q49AN0 593 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 SBK1Q52WX2 424 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 PRR5LQ6MZQ0 368 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 PIK3AP1Q6ZUJ8 805 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 CENPUQ71F23 418 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 PHYKPLQ8IUZ5 450 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 GUF1Q8N442 669 aaKnown RBP6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 ZNF276Q8N554 614 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 IL22RA1Q8N6P7 574 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 FATE1Q969F0 183 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 PLIN2Q99541 437 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 SRSF8Q9BRL6 282 aaKnown RBP6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 ZPBPQ9BS86 351 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 DCUN1D5Q9BTE7 237 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 MROQ9BYG7 248 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 DNAJC18Q9H819 358 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 MAGEE1Q9HCI5 957 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 ZNF304Q9HCX3 659 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 ARMC1Q9NVT9 282 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 P4HTMQ9NXG6 502 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 ANKMY1Q9P2S6 941 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 FBLN5Q9UBX5 448 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 PCSK1NQ9UHG2 260 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 MKLN1Q9UL63 735 aa6.73□□□□□ -1.33
TSPAN3-209ENST00000560715 PP2D1A8MPX8 630 aa6.72□□□□□ -1.33
TSPAN3-209ENST00000560715 M6PRP20645 277 aa6.72□□□□□ -1.33
TSPAN3-209ENST00000560715 CXCR2P25025 360 aa6.72□□□□□ -1.33
TSPAN3-209ENST00000560715 CLK3P49761 638 aaKnown RBP6.72□□□□□ -1.33
TSPAN3-209ENST00000560715 IST1P53990 364 aa6.72□□□□□ -1.33
TSPAN3-209ENST00000560715 SELENBP1Q13228 472 aa6.72□□□□□ -1.33
TSPAN3-209ENST00000560715 SLC15A2Q16348 729 aa6.72□□□□□ -1.33
TSPAN3-209ENST00000560715 LETM2Q2VYF4 491 aa6.72□□□□□ -1.33
TSPAN3-209ENST00000560715 DCAF17Q5H9S7 520 aaPredicted RBP6.72□□□□□ -1.33
TSPAN3-209ENST00000560715 RABGAP1LQ5R372 815 aa6.72□□□□□ -1.33
TSPAN3-209ENST00000560715 ATXN7L2Q5T6C5 722 aaPredicted RBP6.72□□□□□ -1.33
TSPAN3-209ENST00000560715 AGAP7PQ5VUJ5 663 aa6.72□□□□□ -1.33
TSPAN3-209ENST00000560715 SLC30A10Q6XR72 485 aa6.72□□□□□ -1.33
TSPAN3-209ENST00000560715 PRUNE1Q86TP1 453 aa6.72□□□□□ -1.33
TSPAN3-209ENST00000560715 TMEM126BQ8IUX1 230 aa6.72□□□□□ -1.33
TSPAN3-209ENST00000560715 C4orf33Q8N1A6 199 aa6.72□□□□□ -1.33
TSPAN3-209ENST00000560715 TERB1Q8NA31 727 aa6.72□□□□□ -1.33
TSPAN3-209ENST00000560715 C12orf50Q8NA57 414 aaPredicted RBP6.72□□□□□ -1.33
TSPAN3-209ENST00000560715 CATSPER1Q8NEC5 780 aa6.72□□□□□ -1.33
TSPAN3-209ENST00000560715 ADAMTS16Q8TE57 1224 aa6.72□□□□□ -1.33
TSPAN3-209ENST00000560715 SLCO2A1Q92959 643 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms