RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 AP1S2P56377 157 aa13.16□□□□□ -0.3
CSPG4P11-201ENST00000560634 AP3S2P59780 193 aa13.16□□□□□ -0.3
CSPG4P11-201ENST00000560634 SWI5Q1ZZU3 235 aa13.16□□□□□ -0.3
CSPG4P11-201ENST00000560634 EGFLAMQ63HQ2 1017 aa13.16□□□□□ -0.3
CSPG4P11-201ENST00000560634 LPCAT4Q643R3 524 aa13.16□□□□□ -0.3
CSPG4P11-201ENST00000560634 CES5AQ6NT32 575 aa13.16□□□□□ -0.3
CSPG4P11-201ENST00000560634 LCLAT1Q6UWP7 414 aa13.16□□□□□ -0.3
CSPG4P11-201ENST00000560634 SPATA6LQ8N4H0 392 aa13.16□□□□□ -0.3
CSPG4P11-201ENST00000560634 RASSF5Q8WWW0 418 aa13.16□□□□□ -0.3
CSPG4P11-201ENST00000560634 LPGAT1Q92604 370 aa13.16□□□□□ -0.3
CSPG4P11-201ENST00000560634 CLIP3Q96DZ5 547 aa13.16□□□□□ -0.3
CSPG4P11-201ENST00000560634 CENPNQ96H22 339 aaPredicted RBP13.16□□□□□ -0.3
CSPG4P11-201ENST00000560634 AARSD1Q9BTE6 412 aaKnown RBP13.16□□□□□ -0.3
CSPG4P11-201ENST00000560634 MTFR1LQ9H019 292 aa13.16□□□□□ -0.3
CSPG4P11-201ENST00000560634 FAM124BQ9H5Z6 455 aaPredicted RBP13.16□□□□□ -0.3
CSPG4P11-201ENST00000560634 DHRS7Q9Y394 339 aa13.16□□□□□ -0.3
CSPG4P11-201ENST00000560634 GPSM3Q9Y4H4 160 aa13.16□□□□□ -0.3
CSPG4P11-201ENST00000560634 YDJCA8MPS7 323 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 FADS2P1A8MWK0 482 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 SLC30A4O14863 429 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 STK16O75716 305 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 MPSTP25325 297 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 PTP4A2Q12974 167 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 C9orf64Q5T6V5 341 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 HECTD2Q5U5R9 776 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 SPPL2BQ8TCT7 592 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 WDR18Q9BV38 432 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 MRPS23Q9Y3D9 190 aaKnown RBP13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 ZBTB11O95625 1053 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 ANGPTL1O95841 491 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 TOP3BO95985 862 aaKnown RBP13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 RPS9P46781 194 aaKnown RBP13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 CDH4P55283 916 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 RAB15P59190 212 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 CAMK1Q14012 370 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 PARP15Q460N3 678 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 SULT1C3Q6IMI6 304 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 GK5Q6ZS86 529 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 HPS6Q86YV9 775 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 MNTQ99583 582 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 SMURF2Q9HAU4 748 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 TMEM27Q9HBJ8 222 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 PDP1Q9P0J1 537 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 KIAA1522Q9P206 1035 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 PEX16Q9Y5Y5 336 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 SPATA31C2B4DYI2 1134 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 PRODHO43272 600 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 METTL18O95568 372 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 IL1BP01584 269 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 PTX3P26022 381 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 GRB14Q14449 540 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 NOL9Q5SY16 702 aaKnown RBP13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 ADGRD1Q6QNK2 874 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 C15orf52Q6ZUT6 534 aaKnown RBP13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 KBTBD7Q8WVZ9 684 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 APOLD1Q96LR9 279 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 PPM1MQ96MI6 270 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 ZNF490Q9ULM2 529 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 OAS3Q9Y6K5 1087 aaKnown RBP13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 ADAMTS13Q76LX8 1427 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 CACNB4O00305 520 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 B4GALT4O60513 344 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 ADH1AP07327 375 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 HOXA10P31260 410 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 PBX1P40424 430 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 INHBEP58166 350 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 CERCAMQ5T4B2 595 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 PPP1R26Q5T8A7 1209 aaPredicted RBP13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 C11orf65Q8NCR3 313 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 CERKQ8TCT0 537 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 CDCA5Q96FF9 252 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 BTN2A3PQ96KV6 586 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 CSPG4P5Q96PW8 444 aa13.15□□□□□ -0.3
CSPG4P11-201ENST00000560634 ADAMDEC1O15204 470 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 SIN3BO75182 1162 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 PIAS1O75925 651 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 NDST3O95803 873 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 FADS2O95864 444 aaKnown RBP13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 IFNW1P05000 195 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 SMIM10L2AP0DMW4 78 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 SMIM10L2BP0DMW5 78 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 LAMP2P13473 410 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 TNFSF9P41273 254 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 RALGDSQ12967 914 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 SEMA5AQ13591 1074 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 SUZ12Q15022 739 aaKnown RBP13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 KCNA10Q16322 511 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 SNAPC1Q16533 368 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 ATCAYQ86WG3 371 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 ECHDC2Q86YB7 292 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 RGL4Q8IZJ4 473 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 MYO19Q96H55 970 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 DIRAS2Q96HU8 199 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 CLPTM1LQ96KA5 538 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 TRIM2Q9C040 744 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 SGK2Q9HBY8 427 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 MTRRQ9UBK8 725 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 HES2Q9Y543 173 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 U3KQV3 271 aa13.14□□□□□ -0.31
CSPG4P11-201ENST00000560634 ABHD14A-ACY1A0A1B0GW23 586 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms