RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 CARS2Q9HA77 564 aaKnown RBP9.28□□□□□ -0.92
SMAD3-215ENST00000560424 FGF22Q9HCT0 170 aa9.28□□□□□ -0.92
SMAD3-215ENST00000560424 SLAMF7Q9NQ25 335 aa9.28□□□□□ -0.92
SMAD3-215ENST00000560424 PIGVQ9NUD9 493 aa9.28□□□□□ -0.92
SMAD3-215ENST00000560424 TMEM59LQ9UK28 342 aa9.28□□□□□ -0.92
SMAD3-215ENST00000560424 MAP4K5Q9Y4K4 846 aa9.28□□□□□ -0.92
SMAD3-215ENST00000560424 PCDHA3Q9Y5H8 950 aa9.28□□□□□ -0.92
SMAD3-215ENST00000560424 RPS6KL1Q9Y6S9 549 aa9.28□□□□□ -0.92
SMAD3-215ENST00000560424 IGHV1OR21-1A0A087WYE8 117 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 CXorf51AA0A1B0GTR3 108 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 PRSS38A1L453 326 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 TCP11X1B4DZS4 312 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 POLR1CO15160 346 aaPredicted RBP9.27□□□□□ -0.93
SMAD3-215ENST00000560424 LRCH4O75427 683 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 KRT3P12035 628 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 COMTP21964 271 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 STAT5AP42229 794 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 PAFAH1B1P43034 410 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 PMS2P54278 862 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 RNASE9P60153 205 aaKnown RBP9.27□□□□□ -0.93
SMAD3-215ENST00000560424 RHOAP61586 193 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 MC2RQ01718 297 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 MRPL49Q13405 166 aaKnown RBP9.27□□□□□ -0.93
SMAD3-215ENST00000560424 MESDQ14696 234 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 SLC30A9Q6PML9 568 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 LEKR1Q6ZMV7 388 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 FAM183BPQ6ZVS7 135 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 TIPARPQ7Z3E1 657 aaKnown RBP9.27□□□□□ -0.93
SMAD3-215ENST00000560424 POLNQ7Z5Q5 900 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 TP53INP2Q8IXH6 220 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 TTC13Q8NBP0 860 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 OR10G6Q8NH81 332 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 COG1Q8WTW3 980 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 FUBP1Q96AE4 644 aaKnown RBP9.27□□□□□ -0.93
SMAD3-215ENST00000560424 SELENOOQ9BVL4 669 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 CARD6Q9BX69 1037 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 ULBP3Q9BZM4 244 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 RUBCNLQ9H714 662 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 SPATS2LQ9NUQ6 558 aaKnown RBP9.27□□□□□ -0.93
SMAD3-215ENST00000560424 TMEM51Q9NW97 253 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.27□□□□□ -0.93
SMAD3-215ENST00000560424 TAAR2Q9P1P5 351 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 KCND3Q9UK17 655 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 G3BP2Q9UN86 482 aaKnown RBP9.27□□□□□ -0.93
SMAD3-215ENST00000560424 SLC5A6Q9Y289 635 aa9.27□□□□□ -0.93
SMAD3-215ENST00000560424 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.27□□□□□ -0.93
SMAD3-215ENST00000560424 TMEM184BQ9Y519 407 aaPredicted RBP9.27□□□□□ -0.93
SMAD3-215ENST00000560424 FBN2P35556 2912 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 IGLV3-10A0A075B6K4 115 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 PIPSLA2A3N6 862 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 CTAGE15A4D2H0 777 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 ZSCAN5CA6NGD5 496 aaPredicted RBP9.26□□□□□ -0.93
SMAD3-215ENST00000560424 C2CD4BA6NLJ0 364 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 HNRNPRO43390 633 aaKnown RBP9.26□□□□□ -0.93
SMAD3-215ENST00000560424 SPOPO43791 374 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 LDLRP01130 860 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 FGF1P05230 155 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 TUBBP07437 444 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 CTAGE8P0CG41 777 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 GRNP28799 593 aaKnown RBP9.26□□□□□ -0.93
SMAD3-215ENST00000560424 CSF2RBP32927 897 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 PCK1P35558 622 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 ACVRL1P37023 503 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 LEPRP48357 1165 aaKnown RBP9.26□□□□□ -0.93
SMAD3-215ENST00000560424 CXCR3P49682 368 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 LIG3P49916 1009 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 ZNF143P52747 638 aaPredicted RBP9.26□□□□□ -0.93
SMAD3-215ENST00000560424 RWDD2BP57060 319 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 RPL7AP62424 266 aaKnown RBP9.26□□□□□ -0.93
SMAD3-215ENST00000560424 SLC6A3Q01959 620 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 ELOAQ14241 798 aaKnown RBP9.26□□□□□ -0.93
SMAD3-215ENST00000560424 INPP5JQ15735 1006 aaPredicted RBP9.26□□□□□ -0.93
SMAD3-215ENST00000560424 PPP2R5EQ16537 467 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 NADK2Q4G0N4 442 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 C2CD6Q53TS8 623 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 KCTD16Q68DU8 428 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 RWDD4Q6NW29 188 aaKnown RBP9.26□□□□□ -0.93
SMAD3-215ENST00000560424 DCUN1D2Q6PH85 259 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 CTAGE6Q86UF2 777 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 CTAGE4Q8IX94 777 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 RHOT1Q8IXI2 618 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 ZNF683Q8IZ20 524 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 PLA2G15Q8NCC3 412 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 ALG3Q92685 438 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 MARVELD3Q96A59 401 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 STAMBPL1Q96FJ0 436 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 MCEEQ96PE7 176 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 NAP1L3Q99457 506 aaPredicted RBP9.26□□□□□ -0.93
SMAD3-215ENST00000560424 SLC38A3Q99624 504 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 CNPY3Q9BT09 278 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 SLC25A23Q9BV35 468 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 TRIM7Q9C029 511 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 GOLPH3Q9H4A6 298 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 STN1Q9H668 368 aaKnown RBP9.26□□□□□ -0.93
SMAD3-215ENST00000560424 PCDH12Q9NPG4 1184 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 FBXO8Q9NRD0 319 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 TMEM9Q9P0T7 183 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 ERRFI1Q9UJM3 462 aaPredicted RBP9.26□□□□□ -0.93
SMAD3-215ENST00000560424 CROTQ9UKG9 612 aa9.26□□□□□ -0.93
SMAD3-215ENST00000560424 ANKRD36A6QL64 1941 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms