RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 CERCAMQ5T4B2 595 aa13.11□□□□□ -0.31
SMAD3-213ENST00000560175 MEI1Q5TIA1 1274 aa13.11□□□□□ -0.31
SMAD3-213ENST00000560175 CCDC181Q5TID7 509 aa13.11□□□□□ -0.31
SMAD3-213ENST00000560175 ITPRIPL1Q6GPH6 555 aa13.11□□□□□ -0.31
SMAD3-213ENST00000560175 DARS2Q6PI48 645 aaKnown RBP13.11□□□□□ -0.31
SMAD3-213ENST00000560175 MAPK15Q8TD08 544 aa13.11□□□□□ -0.31
SMAD3-213ENST00000560175 ZCCHC14Q8WYQ9 949 aaKnown RBP13.11□□□□□ -0.31
SMAD3-213ENST00000560175 FERMT1Q9BQL6 677 aa13.11□□□□□ -0.31
SMAD3-213ENST00000560175 GSDMCQ9BYG8 508 aa13.11□□□□□ -0.31
SMAD3-213ENST00000560175 GPR63Q9BZJ6 419 aa13.11□□□□□ -0.31
SMAD3-213ENST00000560175 CCDC86Q9H6F5 360 aaKnown RBP13.11□□□□□ -0.31
SMAD3-213ENST00000560175 TRIM39Q9HCM9 518 aa13.11□□□□□ -0.31
SMAD3-213ENST00000560175 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.11□□□□□ -0.31
SMAD3-213ENST00000560175 RABGEF1Q9UJ41 708 aa13.11□□□□□ -0.31
SMAD3-213ENST00000560175 TMPRSS11EQ9UL52 423 aa13.11□□□□□ -0.31
SMAD3-213ENST00000560175 GUCA1BQ9UMX6 200 aa13.11□□□□□ -0.31
SMAD3-213ENST00000560175 TMEM98Q9Y2Y6 226 aa13.11□□□□□ -0.31
SMAD3-213ENST00000560175 AAR2Q9Y312 384 aaKnown RBP13.11□□□□□ -0.31
SMAD3-213ENST00000560175 PCYT1BQ9Y5K3 369 aaPredicted RBP13.11□□□□□ -0.31
SMAD3-213ENST00000560175 PKD1L2Q7Z442 2459 aa13.11□□□□□ -0.31
SMAD3-213ENST00000560175 TCRBV7S2A1N4TA0A589 114 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 GOLGA6CA6NDK9 693 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 GOLGA6BA6NDN3 693 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 GOLGA6L9A6NEM1 432 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 SRRM3A6NNA2 597 aaPredicted RBP13.1□□□□□ -0.31
SMAD3-213ENST00000560175 GPR89AB7ZAQ6 455 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 CHUKO15111 745 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 KCNN4O15554 427 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 NUDT21O43809 227 aaKnown RBP13.1□□□□□ -0.31
SMAD3-213ENST00000560175 NUAK1O60285 661 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 PPFIA2O75334 1257 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 CCDC175P0C221 793 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 GPR89BP0CG08 455 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 GOLGA6DP0CG33 693 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 CHRNA4P43681 627 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 GNPDA1P46926 289 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 CLCNKAP51800 687 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 ILF3Q12906 894 aaKnown RBP eCLIP13.1□□□□□ -0.31
SMAD3-213ENST00000560175 PEX6Q13608 980 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 LRP8Q14114 963 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 ISXQ2M1V0 245 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 C14orf28Q4W4Y0 310 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 ZDHHC20Q5W0Z9 365 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 KCTD11Q693B1 232 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 DENND5AQ6IQ26 1287 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 IGF2-ASQ6U949 168 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 ZNF438Q7Z4V0 828 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 TRIM74Q86UV6 250 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 SFTPA2Q8IWL1 248 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 MDM1Q8TC05 714 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 RTP4Q96DX8 246 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 PPP1R2P1Q96PQ5 205 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 DEPDC7Q96QD5 511 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 VPS35Q96QK1 796 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 CCDC3Q9BQI4 270 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 FRMD8P1Q9BZ68 369 aaPredicted RBP13.1□□□□□ -0.31
SMAD3-213ENST00000560175 ABCG4Q9H172 646 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 CARD9Q9H257 536 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 GOLGA6AQ9NYA3 693 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 TAAR2Q9P1P5 351 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 GULP1Q9UBP9 304 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 RSPH14Q9UHP6 348 aa13.1□□□□□ -0.31
SMAD3-213ENST00000560175 R3HDM2Q9Y2K5 976 aaKnown RBP13.1□□□□□ -0.31
SMAD3-213ENST00000560175 DSPP15924 2871 aaKnown RBP13.1□□□□□ -0.31
SMAD3-213ENST00000560175 A0A1W2PQM1 296 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 PRR19A6NJB7 356 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 CASC3O15234 703 aaKnown RBP13.09□□□□□ -0.31
SMAD3-213ENST00000560175 INPP4BO15327 924 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 DXOO77932 396 aaKnown RBP13.09□□□□□ -0.31
SMAD3-213ENST00000560175 AGTP01019 485 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 ATP1A1P05023 1023 aaKnown RBP13.09□□□□□ -0.31
SMAD3-213ENST00000560175 AK4P27144 223 aaPredicted RBP13.09□□□□□ -0.31
SMAD3-213ENST00000560175 PSMB4P28070 264 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 PDX1P52945 283 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 B4GALNT1Q00973 533 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 CYP4F3Q08477 520 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 OASLQ15646 514 aaKnown RBP13.09□□□□□ -0.31
SMAD3-213ENST00000560175 PARP6Q2NL67 630 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 NAGSQ8N159 534 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 IPMKQ8NFU5 416 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 CCDC110Q8TBZ0 833 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 GLYATL1Q969I3 302 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 OR2M4Q96R27 311 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 FAM118BQ9BPY3 351 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 SPATA16Q9BXB7 569 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 DPEP2Q9H4A9 486 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 IL26Q9NPH9 171 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 SIRPGQ9P1W8 387 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 ATXN10Q9UBB4 475 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 MOSPD1Q9UJG1 213 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 PLEKHM1Q9Y4G2 1056 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 ENTPD2Q9Y5L3 495 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 CFAP47Q6ZTR5 3102 aa13.09□□□□□ -0.31
SMAD3-213ENST00000560175 A0A1W2PNU3 283 aaPredicted RBP13.08□□□□□ -0.32
SMAD3-213ENST00000560175 A6NCN8 305 aa13.08□□□□□ -0.32
SMAD3-213ENST00000560175 AGAP14A8MT82 685 aa13.08□□□□□ -0.32
SMAD3-213ENST00000560175 GAPDHSO14556 408 aaPredicted RBP13.08□□□□□ -0.32
SMAD3-213ENST00000560175 CSO75390 466 aaKnown RBP13.08□□□□□ -0.32
SMAD3-213ENST00000560175 STK10O94804 968 aaKnown RBP13.08□□□□□ -0.32
SMAD3-213ENST00000560175 STIP1P31948 543 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms