RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 TMPRSS4Q9NRS4 437 aa20.54■□□□□ 0.88
PSEN1-225ENST00000560005 DTLQ9NZJ0 730 aa20.54■□□□□ 0.88
PSEN1-225ENST00000560005 ANAPC5Q9UJX4 755 aa20.54■□□□□ 0.88
PSEN1-225ENST00000560005 FCF1Q9Y324 198 aaKnown RBP20.54■□□□□ 0.88
PSEN1-225ENST00000560005 SPTAN1Q13813 2472 aaKnown RBP20.54■□□□□ 0.88
PSEN1-225ENST00000560005 USP9YO00507 2555 aaPredicted RBP20.53■□□□□ 0.88
PSEN1-225ENST00000560005 PRAMEF33A0A0G2JMD5 474 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 WASH4PA8MWX3 477 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 FAM72CH0Y354 149 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 PRAMEF10O60809 474 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 IFNB1P01574 187 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 OR1E1P30953 314 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 GKP32189 559 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 PPARDQ03181 441 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 P3H1Q32P28 736 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 FAM72AQ5TYM5 149 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 MANEALQ5VSG8 457 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 FAM72DQ6L9T8 149 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 RWDD4Q6NW29 188 aaKnown RBP20.53■□□□□ 0.88
PSEN1-225ENST00000560005 MACC1Q6ZN28 852 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 FAM72BQ86X60 149 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 ZFAND4Q86XD8 727 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 OR6K2Q8NGY2 324 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 RAB7BQ96AH8 199 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 RTP4Q96DX8 246 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 TMEM74Q96NL1 305 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 OLFM3Q96PB7 478 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 QKIQ96PU8 341 aaKnown RBP eCLIP20.53■□□□□ 0.88
PSEN1-225ENST00000560005 TM6SF2Q9BZW4 377 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 GEMIN8Q9NWZ8 242 aaKnown RBP20.53■□□□□ 0.88
PSEN1-225ENST00000560005 PAK5Q9P286 719 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 HECAQ9UBI9 543 aaPredicted RBP20.53■□□□□ 0.88
PSEN1-225ENST00000560005 ACTL7AQ9Y615 435 aa20.53■□□□□ 0.88
PSEN1-225ENST00000560005 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.52■□□□□ 0.88
PSEN1-225ENST00000560005 DRGXA6NNA5 263 aa20.52■□□□□ 0.88
PSEN1-225ENST00000560005 C16orf96A6NNT2 1141 aa20.52■□□□□ 0.88
PSEN1-225ENST00000560005 ZMPSTE24O75844 475 aa20.52■□□□□ 0.88
PSEN1-225ENST00000560005 SEC31AO94979 1220 aaKnown RBP20.52■□□□□ 0.88
PSEN1-225ENST00000560005 GP1BBP13224 206 aa20.52■□□□□ 0.88
PSEN1-225ENST00000560005 RHOQP17081 205 aa20.52■□□□□ 0.88
PSEN1-225ENST00000560005 PLTPP55058 493 aa20.52■□□□□ 0.88
PSEN1-225ENST00000560005 YPEL5P62699 121 aa20.52■□□□□ 0.88
PSEN1-225ENST00000560005 ARF5P84085 180 aa20.52■□□□□ 0.88
PSEN1-225ENST00000560005 GBE1Q04446 702 aa20.52■□□□□ 0.88
PSEN1-225ENST00000560005 SLMAPQ14BN4 828 aa20.52■□□□□ 0.88
PSEN1-225ENST00000560005 RYBPQ8N488 228 aaPredicted RBP20.52■□□□□ 0.88
PSEN1-225ENST00000560005 SCG3Q8WXD2 468 aaKnown RBP20.52■□□□□ 0.88
PSEN1-225ENST00000560005 PKNOX2Q96KN3 472 aa20.52■□□□□ 0.88
PSEN1-225ENST00000560005 LRRN3Q9H3W5 708 aa20.52■□□□□ 0.88
PSEN1-225ENST00000560005 VIPAS39Q9H9C1 493 aa20.52■□□□□ 0.88
PSEN1-225ENST00000560005 ATP13A1Q9HD20 1204 aa20.52■□□□□ 0.88
PSEN1-225ENST00000560005 FOXJ2Q9P0K8 574 aa20.52■□□□□ 0.88
PSEN1-225ENST00000560005 DNALI1O14645 258 aaPredicted RBP20.51■□□□□ 0.87
PSEN1-225ENST00000560005 IVDP26440 423 aa20.51■□□□□ 0.87
PSEN1-225ENST00000560005 TNNT3P45378 269 aaPredicted RBP20.51■□□□□ 0.87
PSEN1-225ENST00000560005 GPS1Q13098 491 aa20.51■□□□□ 0.87
PSEN1-225ENST00000560005 ELOCQ15369 112 aa20.51■□□□□ 0.87
PSEN1-225ENST00000560005 PTRH1Q86Y79 214 aaKnown RBP20.51■□□□□ 0.87
PSEN1-225ENST00000560005 FSTL5Q8N475 847 aaPredicted RBP20.51■□□□□ 0.87
PSEN1-225ENST00000560005 MREGQ8N565 214 aa20.51■□□□□ 0.87
PSEN1-225ENST00000560005 FAM71DQ8N9W8 422 aa20.51■□□□□ 0.87
PSEN1-225ENST00000560005 ZYG11BQ9C0D3 744 aa20.51■□□□□ 0.87
PSEN1-225ENST00000560005 MBNL1Q9NR56 388 aaKnown RBP20.51■□□□□ 0.87
PSEN1-225ENST00000560005 ZDHHC18Q9NUE0 388 aa20.51■□□□□ 0.87
PSEN1-225ENST00000560005 ETNK2Q9NVF9 386 aa20.51■□□□□ 0.87
PSEN1-225ENST00000560005 GRHL1Q9NZI5 618 aa20.51■□□□□ 0.87
PSEN1-225ENST00000560005 PCDHB11Q9Y5F2 797 aa20.51■□□□□ 0.87
PSEN1-225ENST00000560005 UNC13CQ8NB66 2214 aa20.51■□□□□ 0.87
PSEN1-225ENST00000560005 NOTCH2Q04721 2471 aa20.51■□□□□ 0.87
PSEN1-225ENST00000560005 UTP20O75691 2785 aaKnown RBP20.51■□□□□ 0.87
PSEN1-225ENST00000560005 IGLV3-10A0A075B6K4 115 aa20.5■□□□□ 0.87
PSEN1-225ENST00000560005 ILVBLA1L0T0 632 aa20.5■□□□□ 0.87
PSEN1-225ENST00000560005 C5orf60A6NFR6 353 aa20.5■□□□□ 0.87
PSEN1-225ENST00000560005 KCNN4O15554 427 aa20.5■□□□□ 0.87
PSEN1-225ENST00000560005 MYBL2P10244 700 aa20.5■□□□□ 0.87
PSEN1-225ENST00000560005 ETV5P41161 510 aa20.5■□□□□ 0.87
PSEN1-225ENST00000560005 SLC20A2Q08357 652 aa20.5■□□□□ 0.87
PSEN1-225ENST00000560005 SLC10A2Q12908 348 aaPredicted RBP20.5■□□□□ 0.87
PSEN1-225ENST00000560005 MORF4L2Q15014 288 aa20.5■□□□□ 0.87
PSEN1-225ENST00000560005 TRIP13Q15645 432 aaPredicted RBP20.5■□□□□ 0.87
PSEN1-225ENST00000560005 ZNF805Q5CZA5 627 aa20.5■□□□□ 0.87
PSEN1-225ENST00000560005 LRRC73Q5JTD7 316 aa20.5■□□□□ 0.87
PSEN1-225ENST00000560005 IZUMO3Q5VZ72 239 aa20.5■□□□□ 0.87
PSEN1-225ENST00000560005 HOOK3Q86VS8 718 aa20.5■□□□□ 0.87
PSEN1-225ENST00000560005 DTX1Q86Y01 620 aa20.5■□□□□ 0.87
PSEN1-225ENST00000560005 HID1Q8IV36 788 aa20.5■□□□□ 0.87
PSEN1-225ENST00000560005 RTL3Q8N8U3 475 aaKnown RBP20.5■□□□□ 0.87
PSEN1-225ENST00000560005 USP7Q93009 1102 aa20.5■□□□□ 0.87
PSEN1-225ENST00000560005 VAT1Q99536 393 aa20.5■□□□□ 0.87
PSEN1-225ENST00000560005 EPN3Q9H201 632 aa20.5■□□□□ 0.87
PSEN1-225ENST00000560005 GPR34Q9UPC5 381 aa20.5■□□□□ 0.87
PSEN1-225ENST00000560005 USP9XQ93008 2570 aaPredicted RBP20.5■□□□□ 0.87
PSEN1-225ENST00000560005 MYO9AB2RTY4 2548 aa20.5■□□□□ 0.87
PSEN1-225ENST00000560005 MFSD11O43934 449 aa20.49■□□□□ 0.87
PSEN1-225ENST00000560005 ALPIP09923 528 aa20.49■□□□□ 0.87
PSEN1-225ENST00000560005 CTSEP14091 401 aa20.49■□□□□ 0.87
PSEN1-225ENST00000560005 RBL1P28749 1068 aa20.49■□□□□ 0.87
PSEN1-225ENST00000560005 ECHS1P30084 290 aa20.49■□□□□ 0.87
PSEN1-225ENST00000560005 BLKP51451 505 aa20.49■□□□□ 0.87
PSEN1-225ENST00000560005 HK3P52790 923 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms