RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 CNOT6Q9ULM6 557 aaKnown RBP12.27□□□□□ -0.45
SMAD3-205ENST00000558428 SUFUQ9UMX1 484 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 SLC17A4Q9Y2C5 497 aa12.27□□□□□ -0.45
SMAD3-205ENST00000558428 LMO7DNF2Z398 122 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 SUN1O94901 812 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 SLC25A14O95258 325 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-205ENST00000558428 GAS8O95995 478 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 KRT14P02533 472 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 IVLP07476 585 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 ANXA6P08133 673 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 GIMD1P0DJR0 217 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 GNPDA1P46926 289 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 FNTAP49354 379 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 VPS41P49754 854 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 PDE1BQ01064 536 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 CDH17Q12864 832 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 SEPT6Q14141 434 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 PTPRCAPQ14761 206 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 POU6F1Q14863 301 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 TRIP13Q15645 432 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-205ENST00000558428 N4BP2L1Q5TBK1 243 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-205ENST00000558428 FAM151BQ6UXP7 276 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 MARK2Q7KZI7 788 aaKnown RBP12.26□□□□□ -0.45
SMAD3-205ENST00000558428 GKN2Q86XP6 184 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 PHYKPLQ8IUZ5 450 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 OR4K2Q8NGD2 314 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 PTCD2Q8WV60 388 aaKnown RBP12.26□□□□□ -0.45
SMAD3-205ENST00000558428 GLYATL1Q969I3 302 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 TMEM168Q9H0V1 697 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 ARFGAP3Q9NP61 516 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 IL26Q9NPH9 171 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 KCTD3Q9Y597 815 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 OAS3Q9Y6K5 1087 aaKnown RBP12.26□□□□□ -0.45
SMAD3-205ENST00000558428 PLXNB3Q9ULL4 1909 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 ASXL3Q9C0F0 2248 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 BPTFQ12830 3046 aa12.26□□□□□ -0.45
SMAD3-205ENST00000558428 RP1P56715 2156 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 KNTC1P50748 2209 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 GLYATL1P3A0A0U1RQE8 302 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 TPP1O14773 563 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 FANCGO15287 622 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 YY2O15391 372 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 FUCA1P04066 466 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 FTH1P19P0C7X4 201 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 CASQ1P31415 396 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 GRIA1P42261 906 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 ZNF140P52738 457 aaPredicted RBP12.25□□□□□ -0.45
SMAD3-205ENST00000558428 TERF1P54274 439 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 TMPRSS15P98073 1019 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 DAB2P98082 770 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 DNAJC3Q13217 504 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 CHRNA6Q15825 494 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 PROX2Q3B8N5 592 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 ATP13A5Q4VNC0 1218 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 ZCCHC8Q6NZY4 707 aaKnown RBP12.25□□□□□ -0.45
SMAD3-205ENST00000558428 TAF8Q7Z7C8 310 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 GALNT13Q8IUC8 556 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 CREG2Q8IUH2 290 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 SDR16C5Q8N3Y7 309 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 OR13C4Q8NGS5 318 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 CCL4L1Q8NHW4 92 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 GDAP1Q8TB36 358 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 GRK7Q8WTQ7 553 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 SCG3Q8WXD2 468 aaKnown RBP12.25□□□□□ -0.45
SMAD3-205ENST00000558428 SCARF2Q96GP6 870 aaPredicted RBP12.25□□□□□ -0.45
SMAD3-205ENST00000558428 APOLD1Q96LR9 279 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 VPS35Q96QK1 796 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 OR2M4Q96R27 311 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 EIF2B3Q9NR50 452 aaKnown RBP12.25□□□□□ -0.45
SMAD3-205ENST00000558428 VPS18Q9P253 973 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 FKBPLQ9UIM3 349 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 APOBEC2Q9Y235 224 aaKnown RBP12.25□□□□□ -0.45
SMAD3-205ENST00000558428 GPSM3Q9Y4H4 160 aa12.25□□□□□ -0.45
SMAD3-205ENST00000558428 MED19A0JLT2 244 aaPredicted RBP12.24□□□□□ -0.45
SMAD3-205ENST00000558428 GAPDHSO14556 408 aaPredicted RBP12.24□□□□□ -0.45
SMAD3-205ENST00000558428 GPR39O43194 453 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 LDB2O43679 373 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 UGT1A9O60656 530 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 PRAMEF1O95521 474 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 CKMT2P17540 419 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 UGT1A6P19224 532 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 UGT1A1P22309 533 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 UGT1A4P22310 534 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 UGT1A3P35503 534 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 UGT1A5P35504 534 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 ADCY8P40145 1251 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 HADHAP40939 763 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 PAFAH1B1P43034 410 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 ETF1P62495 437 aaKnown RBP12.24□□□□□ -0.45
SMAD3-205ENST00000558428 ILF3Q12906 894 aaKnown RBP eCLIP12.24□□□□□ -0.45
SMAD3-205ENST00000558428 GPS1Q13098 491 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 ITGA9Q13797 1035 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 PYCR3Q53H96 274 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 CCDC157Q569K6 752 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 C6orf132Q5T0Z8 1188 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 CERCAMQ5T4B2 595 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 ZNF648Q5T619 568 aaPredicted RBP12.24□□□□□ -0.45
SMAD3-205ENST00000558428 LVRNQ6Q4G3 990 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 SYT10Q6XYQ8 523 aa12.24□□□□□ -0.45
SMAD3-205ENST00000558428 SLCO6A1Q86UG4 719 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms