RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 P2RX3P56373 397 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 TAF5Q15542 800 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 C1orf53Q5VUE5 145 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 CCDC81Q6ZN84 652 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 RTN4RL1Q86UN2 441 aaPredicted RBP10.85□□□□□ -0.67
USP3-206ENST00000558157 ADGRG5Q8IZF4 528 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 SVOPQ8N4V2 548 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 KDM1BQ8NB78 822 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 URGCPQ8TCY9 931 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 RMDN1Q96DB5 314 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 MCRS1Q96EZ8 462 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 SCLYQ96I15 445 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 CDK5RAP1Q96SZ6 601 aaKnown RBP10.85□□□□□ -0.67
USP3-206ENST00000558157 TBCBQ99426 244 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 ZNF670Q9BS34 389 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 EMILIN2Q9BXX0 1053 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 LRRC40Q9H9A6 602 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 DGKBQ9Y6T7 804 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 MAGEB16A2A368 324 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 ARL5CA6NH57 179 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 TEX28O15482 410 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 ZNF623O75123 536 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 EIF2DP41214 584 aaKnown RBP10.85□□□□□ -0.67
USP3-206ENST00000558157 SCNN1GP51170 649 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 CCL23P55773 120 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 EPS8Q12929 822 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 LRRC26Q2I0M4 334 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 TCTN1Q2MV58 587 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 C9orf57Q5W0N0 161 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 RNF19BQ6ZMZ0 732 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 CYP4V2Q6ZWL3 525 aaPredicted RBP10.85□□□□□ -0.67
USP3-206ENST00000558157 CHST15Q7LFX5 561 aaPredicted RBP10.85□□□□□ -0.67
USP3-206ENST00000558157 THAP5Q7Z6K1 395 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 CMC1Q7Z7K0 106 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 LGI2Q8N0V4 545 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 OSCP1Q8WVF1 389 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 ARNTL2Q8WYA1 636 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 PPP1R36Q96LQ0 422 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 TOX2Q96NM4 488 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 BCO2Q9BYV7 579 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 CLPBQ9H078 707 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 DIABLOQ9NR28 239 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 RGS18Q9NS28 235 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 CISHQ9NSE2 258 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 MIOSQ9NXC5 875 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 NAALAD2Q9Y3Q0 740 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 N6AMT1Q9Y5N5 214 aa10.85□□□□□ -0.67
USP3-206ENST00000558157 ICMTO60725 284 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 GABBR2O75899 941 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 STAU1O95793 577 aaKnown RBP10.84□□□□□ -0.67
USP3-206ENST00000558157 FYNP06241 537 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 C2P06681 752 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 HTR1BP28222 390 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 YAP1P46937 504 aaKnown RBP10.84□□□□□ -0.67
USP3-206ENST00000558157 ALDH7A1P49419 539 aaKnown RBP10.84□□□□□ -0.67
USP3-206ENST00000558157 AGKQ53H12 422 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.84□□□□□ -0.67
USP3-206ENST00000558157 FSTL4Q6MZW2 842 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 PIWIL3Q7Z3Z3 882 aaKnown RBP10.84□□□□□ -0.67
USP3-206ENST00000558157 ADCK1Q86TW2 530 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 ZNF598Q86UK7 904 aaKnown RBP10.84□□□□□ -0.67
USP3-206ENST00000558157 FAM20CQ8IXL6 584 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 Q8N9G6 341 aaPredicted RBP10.84□□□□□ -0.67
USP3-206ENST00000558157 MARK4Q96L34 752 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 PEBP4Q96S96 227 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 MCOLN1Q9GZU1 580 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 SLA2Q9H6Q3 261 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 C12orf10Q9HB07 376 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 SLC17A6Q9P2U8 582 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 SFMBT1Q9UHJ3 866 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 ZNF221Q9UK13 617 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 DSEQ9UL01 958 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 PCDHGB1Q9Y5G3 927 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 SNX5Q9Y5X3 404 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 TDRD15B5MCY1 1934 aaKnown RBP10.84□□□□□ -0.67
USP3-206ENST00000558157 TET1Q8NFU7 2136 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 FAM25AB3EWG3 89 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 FAM25CB3EWG5 89 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 FAM25GB3EWG6 89 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 UBDO15205 165 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 LDLRP01130 860 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 CYP3A5P20815 502 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 PRKACBP22694 351 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 IL4RP24394 825 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 IFNA8P32881 189 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 CYP2C18P33260 490 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 NAGLUP54802 743 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 CDH8P55286 799 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 POLD3Q15054 466 aaPredicted RBP10.84□□□□□ -0.67
USP3-206ENST00000558157 CDK10Q15131 360 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 NFE2Q16621 373 aaPredicted RBP10.84□□□□□ -0.67
USP3-206ENST00000558157 PAGE2BQ5JRK9 111 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 RSBN1Q5VWQ0 802 aaPredicted RBP10.84□□□□□ -0.67
USP3-206ENST00000558157 ERAP2Q6P179 960 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 PIWIL4Q7Z3Z4 852 aaKnown RBP10.84□□□□□ -0.67
USP3-206ENST00000558157 GRAMD2AQ8IUY3 354 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 LYSMD2Q8IV50 215 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 MINDY1Q8N5J2 469 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 LRRC52Q8N7C0 313 aa10.84□□□□□ -0.67
USP3-206ENST00000558157 DBF4BQ8NFT6 615 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms