RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 C1QTNF2Q9BXJ5 285 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 SLC17A9Q9BYT1 436 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 EPB41L4BQ9H329 900 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 FBXO4Q9UKT5 387 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 KCTD3Q9Y597 815 aa12.34□□□□□ -0.43
TPM1-209ENST00000558072 TRBV5-4A0A0C4DH59 114 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 A0A1W2PQU0 124 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 CCDC78A2IDD5 438 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 KLHL33A6NCF5 533 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 AGAP14A8MT82 685 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 GPR89AB7ZAQ6 455 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 K7ESF4 209 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 RGS16O15492 202 aaPredicted RBP12.33□□□□□ -0.44
TPM1-209ENST00000558072 BUD23O43709 281 aaKnown RBP12.33□□□□□ -0.44
TPM1-209ENST00000558072 SNRPAP09012 282 aaKnown RBP12.33□□□□□ -0.44
TPM1-209ENST00000558072 GSTM1P09488 218 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 GPR89BP0CG08 455 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 KELP23276 732 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 AKT2P31751 481 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 FOXN2P32314 431 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 ETV3P41162 512 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 NSG1P42857 185 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 GPR1P46091 355 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 ARSDP51689 593 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 SLC12A2P55011 1212 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 TAS2R38P59533 333 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 XIAPP98170 497 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 GSTM4Q03013 218 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 PEX6Q13608 980 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 TMEM259Q4ZIN3 620 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 HENMT1Q5T8I9 393 aaKnown RBP12.33□□□□□ -0.44
TPM1-209ENST00000558072 UGT3A1Q6NUS8 523 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 TRMT10BQ6PF06 316 aaKnown RBP12.33□□□□□ -0.44
TPM1-209ENST00000558072 FAM151BQ6UXP7 276 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 STRA8Q7Z7C7 330 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 PHYKPLQ8IUZ5 450 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 MAML2Q8IZL2 1156 aaPredicted RBP12.33□□□□□ -0.44
TPM1-209ENST00000558072 FBXL6Q8N531 539 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 FAM160A2Q8N612 972 aaPredicted RBP12.33□□□□□ -0.44
TPM1-209ENST00000558072 GPR26Q8NDV2 337 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 UHMK1Q8TAS1 419 aaKnown RBP12.33□□□□□ -0.44
TPM1-209ENST00000558072 PGM2Q96G03 612 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 ZNF514Q96K75 400 aaPredicted RBP12.33□□□□□ -0.44
TPM1-209ENST00000558072 CABS1Q96KC9 395 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 COPS8Q99627 209 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 ABCG8Q9H221 673 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 RHOJQ9H4E5 214 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 MED4Q9NPJ6 270 aa12.33□□□□□ -0.44
TPM1-209ENST00000558072 WSB2Q9NYS7 404 aaPredicted RBP12.33□□□□□ -0.44
TPM1-209ENST00000558072 TLDC2A0PJX2 215 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 IGLON5A6NGN9 336 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 FPGTO14772 594 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 SPINT1O43278 529 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 GPR37L1O60883 481 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 AP2A2O94973 939 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 ESR1P03372 595 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 HOXC4P09017 264 aaPredicted RBP12.32□□□□□ -0.44
TPM1-209ENST00000558072 HNRNPA2B1P22626 353 aaKnown RBP12.32□□□□□ -0.44
TPM1-209ENST00000558072 ARNTP27540 789 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 CNR2P34972 360 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 SRSF5Q13243 272 aaKnown RBP12.32□□□□□ -0.44
TPM1-209ENST00000558072 GTF2H3Q13889 308 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 CHRNA6Q15825 494 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 KIAA0895LQ68EN5 471 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 RAET1GQ6H3X3 334 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 ADAMTSL4Q6UY14 1074 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 PACS1Q6VY07 963 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 C1orf210Q8IVY1 113 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 NXPE1Q8N323 547 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 BTN2A2Q8WVV5 523 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 EID2BQ96D98 161 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 TOE1Q96GM8 510 aaKnown RBP12.32□□□□□ -0.44
TPM1-209ENST00000558072 RBBP8Q99708 897 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 DHRS4Q9BTZ2 278 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 RIOK2Q9BVS4 552 aaKnown RBP12.32□□□□□ -0.44
TPM1-209ENST00000558072 CLPBQ9H078 707 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 PLAC1Q9HBJ0 212 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 PRMT8Q9NR22 394 aaPredicted RBP12.32□□□□□ -0.44
TPM1-209ENST00000558072 PHPT1Q9NRX4 125 aaPredicted RBP12.32□□□□□ -0.44
TPM1-209ENST00000558072 ZDHHC3Q9NYG2 299 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 LGALS13Q9UHV8 139 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 CYP8B1Q9UNU6 501 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 HS3ST3A1Q9Y663 406 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 NFS1Q9Y697 457 aa12.32□□□□□ -0.44
TPM1-209ENST00000558072 NCOR1O75376 2440 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 PRR23AA6NEV1 266 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 FAM47DPA6NHR8 397 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 GOLGA8KD6RF30 607 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 PRAMEF26H0Y7S4 382 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 PRMT5O14744 637 aaPredicted RBP12.31□□□□□ -0.44
TPM1-209ENST00000558072 KPNA5O15131 536 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 MAP3K13O43283 966 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 LATO43561 262 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 VEGFDO43915 354 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 MAGEC1O60732 1142 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 TDGF1P13385 188 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 KRT15P19012 456 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 MSH3P20585 1137 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 CD9P21926 228 aa12.31□□□□□ -0.44
TPM1-209ENST00000558072 RPS3P23396 243 aaKnown RBP eCLIP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms