RNA–Protein interactions for RNA: ENST00000557680.1

PNN-206, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3

Gene PNN, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-206ENST00000557680 TUBB2BQ9BVA1 445 aa4.38□□□□□ -1.71
PNN-206ENST00000557680 NUP85Q9BW27 656 aa4.38□□□□□ -1.71
PNN-206ENST00000557680 SLC29A3Q9BZD2 475 aa4.38□□□□□ -1.71
PNN-206ENST00000557680 DNAJC18Q9H819 358 aa4.38□□□□□ -1.71
PNN-206ENST00000557680 SEBOXQ9HB31 216 aaPredicted RBP4.38□□□□□ -1.71
PNN-206ENST00000557680 HINT3Q9NQE9 182 aaKnown RBP4.38□□□□□ -1.71
PNN-206ENST00000557680 PDGFCQ9NRA1 345 aa4.38□□□□□ -1.71
PNN-206ENST00000557680 LARSQ9P2J5 1176 aaKnown RBP4.38□□□□□ -1.71
PNN-206ENST00000557680 MTRRQ9UBK8 725 aa4.38□□□□□ -1.71
PNN-206ENST00000557680 ARPP21Q9UBL0 812 aaPredicted RBP4.38□□□□□ -1.71
PNN-206ENST00000557680 TSPYL4Q9UJ04 414 aa4.38□□□□□ -1.71
PNN-206ENST00000557680 MAFFQ9ULX9 164 aa4.38□□□□□ -1.71
PNN-206ENST00000557680 ARHGEF17Q96PE2 2063 aaPredicted RBP4.37□□□□□ -1.71
PNN-206ENST00000557680 A0A0B4J293 547 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 EDDM13A0A1B0GTR0 161 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 CPED1A4D0V7 1026 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 STMND1H3BQB6 276 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 GPC4O75487 556 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 TRUB2O95900 331 aaKnown RBP4.37□□□□□ -1.71
PNN-206ENST00000557680 HIST1H2ABP04908 130 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 CBSLP0DN79 551 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 ACTN1P12814 892 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 CYP11B2P19099 503 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 HIST1H2ADP20671 130 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 CBSP35520 551 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 SLC12A2P55011 1212 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 PPIGQ13427 754 aaKnown RBP eCLIP4.37□□□□□ -1.711e-18■■□□□ 12.5
PNN-206ENST00000557680 SNAPC1Q16533 368 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 PNLIPRP3Q17RR3 467 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 CERKLQ49MI3 558 aaPredicted RBP4.37□□□□□ -1.71
PNN-206ENST00000557680 CCDC92Q53HC0 331 aaPredicted RBP4.37□□□□□ -1.71
PNN-206ENST00000557680 KLHL26Q53HC5 615 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 MEX3CQ5U5Q3 659 aaKnown RBP4.37□□□□□ -1.71
PNN-206ENST00000557680 NSUN5P2Q63ZY6 315 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 IYDQ6PHW0 289 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 ZNF782Q6ZMW2 699 aaPredicted RBP4.37□□□□□ -1.71
PNN-206ENST00000557680 FAM57BQ71RH2 274 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 HIST3H2AQ7L7L0 130 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 ARID3BQ8IVW6 561 aaPredicted RBP4.37□□□□□ -1.71
PNN-206ENST00000557680 MCEMP1Q8IX19 187 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 MB21D2Q8IYB1 491 aaPredicted RBP4.37□□□□□ -1.71
PNN-206ENST00000557680 CCAR2Q8N163 923 aaKnown RBP4.37□□□□□ -1.71
PNN-206ENST00000557680 GALNT16Q8N428 558 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 RASGEF1CQ8N431 466 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 SPATA6LQ8N4H0 392 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 OR10S1Q8NGN2 331 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 MOSPD2Q8NHP6 518 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 FIBINQ8TAL6 211 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 ZFAND2BQ8WV99 257 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 RHBDF1Q96CC6 855 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 GRAMD2BQ96HH9 432 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 ZNF570Q96NI8 536 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 RAB3IPQ96QF0 476 aaPredicted RBP4.37□□□□□ -1.71
PNN-206ENST00000557680 GFI1Q99684 422 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 PCGF1Q9BSM1 259 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 SLC25A23Q9BV35 468 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 POLDIP3Q9BY77 421 aaKnown RBP4.37□□□□□ -1.71
PNN-206ENST00000557680 SPATC1LQ9H0A9 340 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 MMP27Q9H306 513 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 KCNK15Q9H427 330 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 MAP6D1Q9H9H5 199 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 COPS7BQ9H9Q2 264 aaPredicted RBP4.37□□□□□ -1.71
PNN-206ENST00000557680 EPB41L5Q9HCM4 733 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 MMP25Q9NPA2 562 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 MBNL1Q9NR56 388 aaKnown RBP4.37□□□□□ -1.71
PNN-206ENST00000557680 THSD1Q9NS62 852 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 PRMT7Q9NVM4 692 aaPredicted RBP4.37□□□□□ -1.71
PNN-206ENST00000557680 KLHL13Q9P2N7 655 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 FBXW11Q9UKB1 542 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 ERVK-11Q9UQG0 969 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 BTBD3Q9Y2F9 522 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 KCNK7Q9Y2U2 307 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 PCDHGA5Q9Y5G8 931 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 GPRASP1Q5JY77 1395 aa4.37□□□□□ -1.71
PNN-206ENST00000557680 TMEM8BA6NDV4 472 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 AKR1B15C9JRZ8 316 aaPredicted RBP4.36□□□□□ -1.71
PNN-206ENST00000557680 SMAD9O15198 467 aaKnown RBP4.36□□□□□ -1.71
PNN-206ENST00000557680 SYNCRIPO60506 623 aaKnown RBP4.36□□□□□ -1.71
PNN-206ENST00000557680 ATG13O75143 517 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 PROP1O75360 226 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 DAB1O75553 588 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 CHRNB1P11230 501 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 ERCC2P18074 760 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 GPD1P21695 349 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 ACHEP22303 614 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 NMBRP28336 390 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 TKTP29401 623 aaKnown RBP4.36□□□□□ -1.71
PNN-206ENST00000557680 KRT2P35908 639 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 TCF7P36402 384 aaPredicted RBP4.36□□□□□ -1.71
PNN-206ENST00000557680 PRCPP42785 496 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 SOX10P56693 466 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 YBEYP58557 167 aaPredicted RBP4.36□□□□□ -1.71
PNN-206ENST00000557680 TUBA4AP68366 448 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 HSF1Q00613 529 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 YWHAHQ04917 246 aaPredicted RBP4.36□□□□□ -1.71
PNN-206ENST00000557680 AP1B1Q10567 949 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 TNIP1Q15025 636 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 ISM2Q6H9L7 571 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 B3GNT6Q6ZMB0 384 aa4.36□□□□□ -1.71
PNN-206ENST00000557680 PPP1R21Q6ZMI0 780 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms