RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 ATG4AQ8WYN0 398 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 EID2BQ96D98 161 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 CRELD1Q96HD1 420 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 WDR24Q96S15 920 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 SPATA16Q9BXB7 569 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 TLR10Q9BXR5 811 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 SUDS3Q9H7L9 328 aaPredicted RBP15.77■□□□□ 0.12
TUBB3-214ENST00000557490 ZNF148Q9UQR1 794 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 SLC17A4Q9Y2C5 497 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 TMEM98Q9Y2Y6 226 aa15.77■□□□□ 0.12
TUBB3-214ENST00000557490 LIASO43766 372 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 CEP104O60308 925 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 ASMTLO95671 621 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 IVLP07476 585 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 MYF5P13349 255 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 STIP1P31948 543 aaKnown RBP15.76■□□□□ 0.11
TUBB3-214ENST00000557490 POLD2P49005 469 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 E2F1Q01094 437 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 P3H1Q32P28 736 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 ZNF569Q5MCW4 686 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 CCNI2Q6ZMN8 369 aaPredicted RBP15.76■□□□□ 0.11
TUBB3-214ENST00000557490 GLT6D1Q7Z4J2 308 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 TRIM74Q86UV6 250 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 GALNT15Q8N3T1 639 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 GPR26Q8NDV2 337 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 C1orf54Q8WWF1 131 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 COX14Q96I36 57 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 UBL7Q96S82 380 aaPredicted RBP15.76■□□□□ 0.11
TUBB3-214ENST00000557490 GORASP1Q9BQQ3 440 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 ZSCAN5AQ9BUG6 496 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 BOCQ9BWV1 1114 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 TMEM168Q9H0V1 697 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 KCNF1Q9H3M0 494 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 NFKBIL1Q9UBC1 381 aaPredicted RBP15.76■□□□□ 0.11
TUBB3-214ENST00000557490 SUFUQ9UMX1 484 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 GPR34Q9UPC5 381 aa15.76■□□□□ 0.11
TUBB3-214ENST00000557490 PTPRBP23467 1997 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 CPED1A4D0V7 1026 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 FADS2P1A8MWK0 482 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 AURKAO14965 403 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 PSMD3O43242 534 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 BPIP17213 487 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 ADRA1AP35348 466 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 ACTN2P35609 894 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 HMGCLP35914 325 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 GDF10P55107 478 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 ILF3Q12906 894 aaKnown RBP eCLIP15.75■□□□□ 0.11
TUBB3-214ENST00000557490 SNX1Q13596 522 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 ZDHHC20Q5W0Z9 365 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 PDPK2PQ6A1A2 396 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 RANBP10Q6VN20 620 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 TMPRSS7Q7RTY8 843 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 LURAP1LQ8IV03 231 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 REXO1L1PQ8IX06 675 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 TTC30BQ8N4P2 665 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 TRAM1L1Q8N609 369 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 ARL10Q8N8L6 244 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 FAM46DQ8NEK8 389 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 PDLIM2Q96JY6 352 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 TBL1YQ9BQ87 522 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 APOL2Q9BQE5 337 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 GSDMCQ9BYG8 508 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 BPIFA1Q9NP55 256 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 TRNAU1APQ9NX07 287 aaKnown RBP15.75■□□□□ 0.11
TUBB3-214ENST00000557490 SIRPGQ9P1W8 387 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 GULP1Q9UBP9 304 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 FEZ2Q9UHY8 353 aaPredicted RBP15.75■□□□□ 0.11
TUBB3-214ENST00000557490 CNOT6Q9ULM6 557 aaKnown RBP15.75■□□□□ 0.11
TUBB3-214ENST00000557490 PKP3Q9Y446 797 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 JRKLQ9Y4A0 524 aa15.75■□□□□ 0.11
TUBB3-214ENST00000557490 TDRD6O60522 2096 aaKnown RBP15.75■□□□□ 0.11
TUBB3-214ENST00000557490 GOLGA4Q13439 2230 aaKnown RBP15.75■□□□□ 0.11
TUBB3-214ENST00000557490 LY6G6EA0A0G2JKS1 128 aa15.74■□□□□ 0.11
TUBB3-214ENST00000557490 FGGP02679 453 aa15.74■□□□□ 0.11
TUBB3-214ENST00000557490 GP1BAP07359 652 aa15.74■□□□□ 0.11
TUBB3-214ENST00000557490 MSNP26038 577 aaKnown RBP15.74■□□□□ 0.11
TUBB3-214ENST00000557490 SPARCL1Q14515 664 aa15.74■□□□□ 0.11
TUBB3-214ENST00000557490 OASLQ15646 514 aaKnown RBP15.74■□□□□ 0.11
TUBB3-214ENST00000557490 SMAD1Q15797 465 aaKnown RBP15.74■□□□□ 0.11
TUBB3-214ENST00000557490 CCNG2Q16589 344 aa15.74■□□□□ 0.11
TUBB3-214ENST00000557490 LONRF2Q1L5Z9 754 aa15.74■□□□□ 0.11
TUBB3-214ENST00000557490 MARK2Q7KZI7 788 aaKnown RBP15.74■□□□□ 0.11
TUBB3-214ENST00000557490 EFL1Q7Z2Z2 1120 aaKnown RBP15.74■□□□□ 0.11
TUBB3-214ENST00000557490 TMPRSS12Q86WS5 348 aa15.74■□□□□ 0.11
TUBB3-214ENST00000557490 GALNT13Q8IUC8 556 aa15.74■□□□□ 0.11
TUBB3-214ENST00000557490 SLC35F3Q8IY50 421 aa15.74■□□□□ 0.11
TUBB3-214ENST00000557490 IFI44Q8TCB0 444 aa15.74■□□□□ 0.11
TUBB3-214ENST00000557490 SLC39A7Q92504 469 aa15.74■□□□□ 0.11
TUBB3-214ENST00000557490 NAT6Q93015 286 aa15.74■□□□□ 0.11
TUBB3-214ENST00000557490 RTP4Q96DX8 246 aa15.74■□□□□ 0.11
TUBB3-214ENST00000557490 SCARF2Q96GP6 870 aaPredicted RBP15.74■□□□□ 0.11
TUBB3-214ENST00000557490 PLEKHG4BQ96PX9 1271 aa15.74■□□□□ 0.11
TUBB3-214ENST00000557490 OR2M4Q96R27 311 aa15.74■□□□□ 0.11
TUBB3-214ENST00000557490 LRRC40Q9H9A6 602 aa15.74■□□□□ 0.11
TUBB3-214ENST00000557490 TRMT1Q9NXH9 659 aaKnown RBP15.74■□□□□ 0.11
TUBB3-214ENST00000557490 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.74■□□□□ 0.11
TUBB3-214ENST00000557490 VPS18Q9P253 973 aa15.74■□□□□ 0.11
TUBB3-214ENST00000557490 ZKSCAN5Q9Y2L8 839 aa15.74■□□□□ 0.11
TUBB3-214ENST00000557490 U3KQA8 63 aa15.74■□□□□ 0.11
TUBB3-214ENST00000557490 PTPN13Q12923 2485 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms