RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 ATP1A1P05023 1023 aaKnown RBP14.06□□□□□ -0.16
SNX6-210ENST00000557341 CD82P27701 267 aa14.06□□□□□ -0.16
SNX6-210ENST00000557341 CD1CP29017 333 aa14.06□□□□□ -0.16
SNX6-210ENST00000557341 GPLD1P80108 840 aa14.06□□□□□ -0.16
SNX6-210ENST00000557341 AP1B1Q10567 949 aa14.06□□□□□ -0.16
SNX6-210ENST00000557341 GALNT3Q14435 633 aa14.06□□□□□ -0.16
SNX6-210ENST00000557341 TGIF1Q15583 401 aa14.06□□□□□ -0.16
SNX6-210ENST00000557341 SKOR2Q2VWA4 1001 aaPredicted RBP14.06□□□□□ -0.16
SNX6-210ENST00000557341 TMEM164Q5U3C3 297 aa14.06□□□□□ -0.16
SNX6-210ENST00000557341 USP53Q70EK8 1073 aa14.06□□□□□ -0.16
SNX6-210ENST00000557341 VSTM4Q8IW00 320 aa14.06□□□□□ -0.16
SNX6-210ENST00000557341 CNTD1Q8N815 330 aa14.06□□□□□ -0.16
SNX6-210ENST00000557341 RCBTB1Q8NDN9 531 aa14.06□□□□□ -0.16
SNX6-210ENST00000557341 SLC37A2Q8TED4 501 aa14.06□□□□□ -0.16
SNX6-210ENST00000557341 USP7Q93009 1102 aa14.06□□□□□ -0.16
SNX6-210ENST00000557341 CCDC74BQ96LY2 380 aa14.06□□□□□ -0.16
SNX6-210ENST00000557341 CHP1Q99653 195 aa14.06□□□□□ -0.16
SNX6-210ENST00000557341 DPYSL5Q9BPU6 564 aa14.06□□□□□ -0.16
SNX6-210ENST00000557341 MAK16Q9BXY0 300 aaKnown RBP14.06□□□□□ -0.16
SNX6-210ENST00000557341 B3GNT4Q9C0J1 378 aa14.06□□□□□ -0.16
SNX6-210ENST00000557341 FAM83DQ9H4H8 585 aa14.06□□□□□ -0.16
SNX6-210ENST00000557341 STN1Q9H668 368 aaKnown RBP14.06□□□□□ -0.16
SNX6-210ENST00000557341 NHEJ1Q9H9Q4 299 aaPredicted RBP14.06□□□□□ -0.16
SNX6-210ENST00000557341 KCNK4Q9NYG8 393 aa14.06□□□□□ -0.16
SNX6-210ENST00000557341 FOXJ2Q9P0K8 574 aa14.06□□□□□ -0.16
SNX6-210ENST00000557341 IGHV5-10-1A0A0J9YXX1 117 aa14.05□□□□□ -0.16
SNX6-210ENST00000557341 RGSL1A5PLK6 1076 aa14.05□□□□□ -0.16
SNX6-210ENST00000557341 C3orf70A6NLC5 250 aaPredicted RBP14.05□□□□□ -0.16
SNX6-210ENST00000557341 FADS2P1A8MWK0 482 aa14.05□□□□□ -0.16
SNX6-210ENST00000557341 C9orf172C9J069 976 aa14.05□□□□□ -0.16
SNX6-210ENST00000557341 ZFXP17010 805 aaPredicted RBP14.05□□□□□ -0.16
SNX6-210ENST00000557341 CSF2RBP32927 897 aa14.05□□□□□ -0.16
SNX6-210ENST00000557341 LIMK2P53671 638 aa14.05□□□□□ -0.16
SNX6-210ENST00000557341 TRA2AQ13595 282 aaKnown RBP eCLIP14.05□□□□□ -0.16
SNX6-210ENST00000557341 PDK1Q15118 436 aa14.05□□□□□ -0.16
SNX6-210ENST00000557341 LRRC38Q5VT99 294 aa14.05□□□□□ -0.16
SNX6-210ENST00000557341 ZNF574Q6ZN55 896 aaPredicted RBP14.05□□□□□ -0.16
SNX6-210ENST00000557341 CHST15Q7LFX5 561 aaPredicted RBP14.05□□□□□ -0.16
SNX6-210ENST00000557341 LYSMD3Q7Z3D4 306 aa14.05□□□□□ -0.16
SNX6-210ENST00000557341 SFRP1Q8N474 314 aa14.05□□□□□ -0.16
SNX6-210ENST00000557341 OR4D9Q8NGE8 314 aa14.05□□□□□ -0.16
SNX6-210ENST00000557341 OLFM3Q96PB7 478 aa14.05□□□□□ -0.16
SNX6-210ENST00000557341 WDR24Q96S15 920 aa14.05□□□□□ -0.16
SNX6-210ENST00000557341 CEP41Q9BYV8 373 aa14.05□□□□□ -0.16
SNX6-210ENST00000557341 RMI1Q9H9A7 625 aa14.05□□□□□ -0.16
SNX6-210ENST00000557341 ZNHIT2Q9UHR6 403 aa14.05□□□□□ -0.16
SNX6-210ENST00000557341 PCDHB11Q9Y5F2 797 aa14.05□□□□□ -0.16
SNX6-210ENST00000557341 OAS3Q9Y6K5 1087 aaKnown RBP14.05□□□□□ -0.16
SNX6-210ENST00000557341 DUX1O43812 170 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 SLC4A1P02730 911 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 THRAP10827 490 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 SLC2A4P14672 509 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 SLC1A1P43005 524 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 PPM1FP49593 454 aaPredicted RBP14.04□□□□□ -0.16
SNX6-210ENST00000557341 DCDC1P59894 354 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 DYNLT1P63172 113 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 HHEXQ03014 270 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 LY6DQ14210 128 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 ZNF569Q5MCW4 686 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 MANEAQ5SRI9 462 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 NKAIN2Q5VXU1 208 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 ZNF605Q86T29 641 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 NT5DC3Q86UY8 548 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 RFX6Q8HWS3 928 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 CNGA4Q8IV77 575 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 RHOT1Q8IXI2 618 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 CCDC112Q8NEF3 446 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 OR10G6Q8NH81 332 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 SGF29Q96ES7 293 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 IMP4Q96G21 291 aaKnown RBP14.04□□□□□ -0.16
SNX6-210ENST00000557341 AHCYL2Q96HN2 611 aaKnown RBP14.04□□□□□ -0.16
SNX6-210ENST00000557341 AGAP3Q96P47 875 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 TRIB3Q96RU7 358 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 SLC38A3Q99624 504 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 HERPUD2Q9BSE4 406 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 BRD8Q9H0E9 1235 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 TSPY26PQ9H489 355 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 ZFYVE1Q9HBF4 777 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 DDX56Q9NY93 547 aaKnown RBP14.04□□□□□ -0.16
SNX6-210ENST00000557341 NFKBIL1Q9UBC1 381 aaPredicted RBP14.04□□□□□ -0.16
SNX6-210ENST00000557341 CNOT6Q9ULM6 557 aaKnown RBP14.04□□□□□ -0.16
SNX6-210ENST00000557341 KCNK6Q9Y257 313 aa14.04□□□□□ -0.16
SNX6-210ENST00000557341 PCYT1BQ9Y5K3 369 aaPredicted RBP14.04□□□□□ -0.16
SNX6-210ENST00000557341 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.03□□□□□ -0.16
SNX6-210ENST00000557341 STMND1H3BQB6 276 aa14.03□□□□□ -0.16
SNX6-210ENST00000557341 SPOPO43791 374 aa14.03□□□□□ -0.16
SNX6-210ENST00000557341 EML2O95834 649 aa14.03□□□□□ -0.16
SNX6-210ENST00000557341 CCL4P13236 92 aa14.03□□□□□ -0.16
SNX6-210ENST00000557341 ACP5P13686 325 aa14.03□□□□□ -0.16
SNX6-210ENST00000557341 PLA2G2AP14555 144 aa14.03□□□□□ -0.16
SNX6-210ENST00000557341 CSTF2P33240 577 aaKnown RBP eCLIP14.03□□□□□ -0.16
SNX6-210ENST00000557341 SRSF6Q13247 344 aaKnown RBP14.03□□□□□ -0.16
SNX6-210ENST00000557341 SQSTM1Q13501 440 aa14.03□□□□□ -0.16
SNX6-210ENST00000557341 SLC14A2Q15849 920 aa14.03□□□□□ -0.16
SNX6-210ENST00000557341 PCSK7Q16549 785 aa14.03□□□□□ -0.16
SNX6-210ENST00000557341 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.03□□□□□ -0.16
SNX6-210ENST00000557341 NPNTQ6UXI9 565 aa14.03□□□□□ -0.16
SNX6-210ENST00000557341 ZFAND4Q86XD8 727 aa14.03□□□□□ -0.16
SNX6-210ENST00000557341 ZNF761Q86XN6 746 aaPredicted RBP14.03□□□□□ -0.16
SNX6-210ENST00000557341 DTX1Q86Y01 620 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms